| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3173 |
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| Symbol | |
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| ID | 3965607 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 4049491 |
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| End bp | 4050486 |
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| Gene Length | 996 bp |
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| Protein Length | 331 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637922270 |
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| Product | putative sodium/calcium exchanger protein |
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| Protein accession | YP_528642 |
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| Protein GI | 90022815 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0530] Ca2+/Na+ antiporter |
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| TIGRFAM ID | [TIGR00367] K+-dependent Na+/Ca+ exchanger related-protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.222381 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTAGATA CCATCCCGCC CATTGCCCTC GCCGCAATAG CCGTACTTAT AGGTTTTGGT
GGTTTAGTTT GGAGCGCTGA CCGCTTCGTT GCAGGCAGCG CCGCTATAGC AAAATCATTT
GGCGTAGCAC CTTTGGTAAT TGGCCTCACC ATTGTGTCGT TTGGTACATC TGCGCCCGAA
GTGATGGTGT CTATTAGCGC CTCGCTAAAA GACGCGGGCG ACTTAGCTAT TGGCAACGCG
CTAGGGTCTA ACATAGCTAA TATCGGCTTG GTGTTAGGCG CAACCTTACT TATTGCAGCC
ATTCCAGTAC AAAAACATAT TTTTAGGCAC GAGCTGCCGG TTCTATTGCT CGTCACAATA
ATAAGTGGCG CCCTTCTTTA CGGTGGCGTT TTAAGCCCGT GGGAAGGCTG GTTGTTACTC
GCCTTATTGC CCGTACTAAT GCTTTACCTT GTGCGCGCCA AGCAAAAAGA GCTTAGCCCC
GCAGAAATAG ATCAAGAACA GGAAGACATT CCTGAAATGT CACGGCCGCG AGCAATACTT
TGGTTTGCCA TTGGCTTGAT AGCGCTAATG ATCAGCTCAG AAATATTAGT GTGGGGCGCA
AAAACAACCG CAGAGTATTT TTCTGTTAGC CCACTCATTA TTGGCCTTAC GGTTATTGCT
GTTGGCACCA GCTTGCCAGA GCTAGCGGCC TCGGTAATGA GCGCATTAAA AGGCCACCAC
GATATTGCGC TGGGCAACAT CATTGGCTCC AACATTTTCA ACTTGCTTGC GGTAATGGCG
GTGCCAGGTA TTATTTCCCC GCCAATTATG GAAGCTGCAG TTTTTAATCG CGATTACATG
ACAATGCTCG GCATTACGCT GATTATCACC GCCGCTATTG CTATAGTGCT ATTGCGCAAA
AACAGCAAAG GCACTACTCA ACTGGGCAAA GGCACTGGCT TTGTGTTACT TGGCTGTTAT
GTGGCCTACT ATGCGTACTT GTTTTACACC AACTAG
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| Protein sequence | MLDTIPPIAL AAIAVLIGFG GLVWSADRFV AGSAAIAKSF GVAPLVIGLT IVSFGTSAPE
VMVSISASLK DAGDLAIGNA LGSNIANIGL VLGATLLIAA IPVQKHIFRH ELPVLLLVTI
ISGALLYGGV LSPWEGWLLL ALLPVLMLYL VRAKQKELSP AEIDQEQEDI PEMSRPRAIL
WFAIGLIALM ISSEILVWGA KTTAEYFSVS PLIIGLTVIA VGTSLPELAA SVMSALKGHH
DIALGNIIGS NIFNLLAVMA VPGIISPPIM EAAVFNRDYM TMLGITLIIT AAIAIVLLRK
NSKGTTQLGK GTGFVLLGCY VAYYAYLFYT N
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