| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3162 |
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| Symbol | |
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| ID | 3965596 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 4039525 |
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| End bp | 4040118 |
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| Gene Length | 594 bp |
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| Protein Length | 197 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637922259 |
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| Product | glutamyl-tRNA(Gln) amidotransferase B subunit |
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| Protein accession | YP_528631 |
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| Protein GI | 90022804 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0723] Rieske Fe-S protein |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR01416] ubiquinol-cytochrome c reductase, iron-sulfur subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 0.478451 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGTAATG ACGGTGTAAA TGAAGGGCGT CGCCGCGTTT TAACCGCGTT AACGTCTGTT
GTCGGTGCTG CCGGCGTAGT TGGTGCTGCC GTACCATTCG TAGGGTCTTG GAACCCAAGT
GCCAAAGCGA AAGCTGCTGG CGCTCCTGTC GAAGTCAATA TTTCTAAGCT TGAGCCTGGT
CAGATGGTGA CCATCGAGTG GCGCGGTAAG CCCGTTTATG TGGTTCGTCG TACCCAAGAA
GCACTCGATA ACTTAGCGAA AGGTGAAGGT AAATTACGTG ATCCTGGTTC TGAGAAATCA
GAGCAGCCGG AATACACCAA AAACCCTGTT CGCTCTATCA AAGAAGAATA CCTTGTGTTG
TTAGGCTTAT GCACACACCT TGGTTGTGCG CCTACCTACC GCCCAGAGGT TGGTGCGGAA
GACCTAGGTG GTTCTGAGTG GATGGGTGGC TTCTTCTGTC GTTGTCACGG TTCCAAATTC
GATTTAGCTG GTCGCGTATT GCAAGGCGTA CCTGCCCCTG TGAACCTGAC CGTTCCCCCA
TATAAGTATA TTAGCGACGA CGTTATTGTT GTCGGCTTAG ATCAGGAGGC GTAA
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| Protein sequence | MSNDGVNEGR RRVLTALTSV VGAAGVVGAA VPFVGSWNPS AKAKAAGAPV EVNISKLEPG
QMVTIEWRGK PVYVVRRTQE ALDNLAKGEG KLRDPGSEKS EQPEYTKNPV RSIKEEYLVL
LGLCTHLGCA PTYRPEVGAE DLGGSEWMGG FFCRCHGSKF DLAGRVLQGV PAPVNLTVPP
YKYISDDVIV VGLDQEA
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