Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_3153 |
Symbol | |
ID | 3965587 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 4029857 |
End bp | 4030951 |
Gene Length | 1095 bp |
Protein Length | 364 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637922250 |
Product | AraC family transcriptional regulator |
Protein accession | YP_528622 |
Protein GI | 90022795 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTGCGC ACCTAAGCTT AAGATTTTTT CTGTTATATC TTCTACTTAA AGCTTTGAAC TTTGGCTTTG AATGGTTGCT AGTGAACCCC GATACCCCCT ACAAAGCCGC ATGGCTGGCT TTGCTTATGG CCAGTTCATT TTTGATGGCG CCGTGCGTGT GGTTGCTTGC ACGGGAAATT GATCGCAATG CGCCACCGCG CTTATGGCCA ATTGCCTGGG GCCAATGCGC GGTTGTATTG GCGGGCTTTA TATTATGTAT ACCGCTATTT TTGGCAGCCA ATCAAAGCGT TTTGCTAGTA GATCCATCCC GTGCGAAACC CCACTGGTTC AATCTCACCC ATACCACCAT GGTAGGCGCA GTATTGCTTT ATCTCGTCCA AGTCCCCTGG TATTTATCGC GCAGCGTAAG CCTATTTCGC GAACGCCTAC GCATTAACAA GTTTTTATTT TCTAACATTG ATGAGCCGGC CCTTAACGCT TTGCGCGCTT TAATTTGGGT TATGGCTGCA AGCTGGCTGT TTAACTTACT ACGCATGCTG CATACGATGA TTTTAGAGCC ATCACAAGTA TGGAACCTGC TAATAAGCGC CTGTGAAATA GGGGTAACCA TTACGGCGCT GTACGTTATT TTTAAACGCT GTTGGCAATA CAGTGTTGAC GATCAAACTA TGGTTGAATC CGTAAGCCCC GAGCTAAAAG AACAGGCTTC GCTCCTACAG GGCGACAAGT GCGCCAAGTA CGCCAAGTCG TCGCTTGATC AAACTACACG AACTCGGGTA GCTAAAAAGA TTCTAGCTCA GTTTGAAGAA GAGAAAATAT ACCGTAAGAA TGGCCTAAAG CTGCAAGATT TATGCGTTGC CACAAATGAG AGCGCCCACT ATATATCACA GGTAATAAAC CAAGAGCTGG GGTTCAGCTT TTTTGATTTA GTGAACAAAT ATCGAATTGA AGAGGCACAA CAGAAGCTAA AACAAAATCG CGACCTACCT ATTTTAGATA TTGCCCTAGA GGTTGGGTTT AATTCGAAAC CTACTTTTAA TAAAGCCTTT AAACTGCGAG TTGGGCAAAC ACCCAGTGAA TTCCGAGCAA AGTAG
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Protein sequence | MFAHLSLRFF LLYLLLKALN FGFEWLLVNP DTPYKAAWLA LLMASSFLMA PCVWLLAREI DRNAPPRLWP IAWGQCAVVL AGFILCIPLF LAANQSVLLV DPSRAKPHWF NLTHTTMVGA VLLYLVQVPW YLSRSVSLFR ERLRINKFLF SNIDEPALNA LRALIWVMAA SWLFNLLRML HTMILEPSQV WNLLISACEI GVTITALYVI FKRCWQYSVD DQTMVESVSP ELKEQASLLQ GDKCAKYAKS SLDQTTRTRV AKKILAQFEE EKIYRKNGLK LQDLCVATNE SAHYISQVIN QELGFSFFDL VNKYRIEEAQ QKLKQNRDLP ILDIALEVGF NSKPTFNKAF KLRVGQTPSE FRAK
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