Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_3152 |
Symbol | |
ID | 3965586 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 4028639 |
End bp | 4029664 |
Gene Length | 1026 bp |
Protein Length | 341 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637922249 |
Product | methionine sulfoxide reductase B |
Protein accession | YP_528621 |
Protein GI | 90022794 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2382] Enterochelin esterase and related enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 47 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAGTTA AATATTCGTT CATCTTATCT ACTTTATTGC TGCTTTTTGG CTCAAGCTAT TGTTTAGCCG GTGCTGTCGA AAAGCACACC ATAAAATCGA AAGCGTTAGA GCATAGCCTA ATTGGTGTTG CCTCAGAAAG AAACGTTTAT GTTTACCTGC CAGATGGGTA CCAACAAGGC AAAAAAGCGT ACCCCATTAT TTACTATGTT GCGAATCTCG ATCAGCCCAT TAACGCAGAG CTAACTGCGG TGCTAGACGA CGCTATTGCC AAAGGTGAGC TGCCTCCTTG CATATTTGTT AGTGCAGACT TTTCTTTAAC GCCGGGTTTT AACTTTTTTG GCAACAATGA TGTGGTTGGC CATTGGCTCG ATTTTATTCA TCAAGATCTG CGAAATTGGG TAGAGTCTAA CTATCGCGTA AAACGCGGTG CCAAACATCG CGCCATTAGC GGCCATTTTT TAGGTGCTTA CGCAGCCATA AAACTTGCAA TGTTCTACCC CGAAACGTAT GGCAGTGTTT ACGGTTTGCA CCCAGTGGCA ACAGAGTACG GCGATCGCCC GTTTCTGTTT AAACCAAATT GGGAGGAGGT TCATAGTGCA AAGGGTGCTG CCGATTTAAA GCAGCCATAC TCTGCGGCTT TTGTGTCTAT GGCGCAGGCC TACTTACCCA ATACAAATAA GCCGCCATTT TACGCGGACT TTATTGTAGA GAAGGTGAAT GGCGAGCTAG TCCCCGCTGT TGCCAATATA CGCAAACTTA AACAAACTTT TCACCTTGCC GACCTCACTC CCGAGTACGC AGAGAACTTA CTTAAACTAC GTGGCATAGG TATGGATTGG GGGCGTAACG ATCAAAACTG GGGCCATGTA ATTGGTGCTA GACGCTATTC TGTGTTGCTT GAAAACTTTG GTATAGCCCA CGACGCTGAA GAGCACTTGG GTAATGGTTG GGACTATCAG TTCCGCTTAA ACGGTAAAGT TCGCACCAGA ATGCTTCCGT TTTTGGGTAA GTATTTAGAA CCGTAA
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Protein sequence | MSVKYSFILS TLLLLFGSSY CLAGAVEKHT IKSKALEHSL IGVASERNVY VYLPDGYQQG KKAYPIIYYV ANLDQPINAE LTAVLDDAIA KGELPPCIFV SADFSLTPGF NFFGNNDVVG HWLDFIHQDL RNWVESNYRV KRGAKHRAIS GHFLGAYAAI KLAMFYPETY GSVYGLHPVA TEYGDRPFLF KPNWEEVHSA KGAADLKQPY SAAFVSMAQA YLPNTNKPPF YADFIVEKVN GELVPAVANI RKLKQTFHLA DLTPEYAENL LKLRGIGMDW GRNDQNWGHV IGARRYSVLL ENFGIAHDAE EHLGNGWDYQ FRLNGKVRTR MLPFLGKYLE P
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