Gene Sde_3152 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_3152 
Symbol 
ID3965586 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp4028639 
End bp4029664 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content45% 
IMG OID637922249 
Productmethionine sulfoxide reductase B 
Protein accessionYP_528621 
Protein GI90022794 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2382] Enterochelin esterase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGTTA AATATTCGTT CATCTTATCT ACTTTATTGC TGCTTTTTGG CTCAAGCTAT 
TGTTTAGCCG GTGCTGTCGA AAAGCACACC ATAAAATCGA AAGCGTTAGA GCATAGCCTA
ATTGGTGTTG CCTCAGAAAG AAACGTTTAT GTTTACCTGC CAGATGGGTA CCAACAAGGC
AAAAAAGCGT ACCCCATTAT TTACTATGTT GCGAATCTCG ATCAGCCCAT TAACGCAGAG
CTAACTGCGG TGCTAGACGA CGCTATTGCC AAAGGTGAGC TGCCTCCTTG CATATTTGTT
AGTGCAGACT TTTCTTTAAC GCCGGGTTTT AACTTTTTTG GCAACAATGA TGTGGTTGGC
CATTGGCTCG ATTTTATTCA TCAAGATCTG CGAAATTGGG TAGAGTCTAA CTATCGCGTA
AAACGCGGTG CCAAACATCG CGCCATTAGC GGCCATTTTT TAGGTGCTTA CGCAGCCATA
AAACTTGCAA TGTTCTACCC CGAAACGTAT GGCAGTGTTT ACGGTTTGCA CCCAGTGGCA
ACAGAGTACG GCGATCGCCC GTTTCTGTTT AAACCAAATT GGGAGGAGGT TCATAGTGCA
AAGGGTGCTG CCGATTTAAA GCAGCCATAC TCTGCGGCTT TTGTGTCTAT GGCGCAGGCC
TACTTACCCA ATACAAATAA GCCGCCATTT TACGCGGACT TTATTGTAGA GAAGGTGAAT
GGCGAGCTAG TCCCCGCTGT TGCCAATATA CGCAAACTTA AACAAACTTT TCACCTTGCC
GACCTCACTC CCGAGTACGC AGAGAACTTA CTTAAACTAC GTGGCATAGG TATGGATTGG
GGGCGTAACG ATCAAAACTG GGGCCATGTA ATTGGTGCTA GACGCTATTC TGTGTTGCTT
GAAAACTTTG GTATAGCCCA CGACGCTGAA GAGCACTTGG GTAATGGTTG GGACTATCAG
TTCCGCTTAA ACGGTAAAGT TCGCACCAGA ATGCTTCCGT TTTTGGGTAA GTATTTAGAA
CCGTAA
 
Protein sequence
MSVKYSFILS TLLLLFGSSY CLAGAVEKHT IKSKALEHSL IGVASERNVY VYLPDGYQQG 
KKAYPIIYYV ANLDQPINAE LTAVLDDAIA KGELPPCIFV SADFSLTPGF NFFGNNDVVG
HWLDFIHQDL RNWVESNYRV KRGAKHRAIS GHFLGAYAAI KLAMFYPETY GSVYGLHPVA
TEYGDRPFLF KPNWEEVHSA KGAADLKQPY SAAFVSMAQA YLPNTNKPPF YADFIVEKVN
GELVPAVANI RKLKQTFHLA DLTPEYAENL LKLRGIGMDW GRNDQNWGHV IGARRYSVLL
ENFGIAHDAE EHLGNGWDYQ FRLNGKVRTR MLPFLGKYLE P