Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_3147 |
Symbol | |
ID | 3965581 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 4022877 |
End bp | 4023461 |
Gene Length | 585 bp |
Protein Length | 194 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637922244 |
Product | phosphoheptose isomerase |
Protein accession | YP_528616 |
Protein GI | 90022789 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0279] Phosphoheptose isomerase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCCAAC GCGTTTATTC TCTTTTTCAG CAAAGTGTTG AAGCTAAAAT GCAAGTGGGC GAAGAGCTCG CACCACTTAT TAATCAAGCC GGCGATATAC TGGTAGAAAG CCTTATTCAC GAAGGCAAAA TACTAATATG CGGCAACGGC GTTTCTGCAG CACTGGCACA GATTTTTAGC TCGTCGCTTA TCGACCGCTT CGAAAAAGAA CGCCCAAGCT TGCCCGCTAT TTGGTTGGGC AGCAATATAG CCACCTACAC CGCCATTACC GCCGACTACA ACCAAAGTGA AGTGTACGCA AAACCCGTGC GCGCTCTGGG CCAAGAAGGC GATATTTTGG TTGTAATCAG CAGTAGTGGT AACTCGGCCA ATTTAGTACA AGCTATTTCT GCAGCACACG ACCGCGGCAT GAATGTTATT GCACTTACCG GCCGCGACGG CGGAGATATT TCCTCGCTGC TTGATGTCAA CGATATAGAG CTGCGCGCCG ATTTGAATTC TCGAGGTCGT ATTCACGAAG TGCATATGCT TACAATTTTT TGCCTGTGCG ACCTCATCGA TCACCGCCTA TTTGGACTGG AGTAA
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Protein sequence | MPQRVYSLFQ QSVEAKMQVG EELAPLINQA GDILVESLIH EGKILICGNG VSAALAQIFS SSLIDRFEKE RPSLPAIWLG SNIATYTAIT ADYNQSEVYA KPVRALGQEG DILVVISSSG NSANLVQAIS AAHDRGMNVI ALTGRDGGDI SSLLDVNDIE LRADLNSRGR IHEVHMLTIF CLCDLIDHRL FGLE
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