| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3107 |
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| Symbol | |
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| ID | 3965507 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 3968940 |
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| End bp | 3971360 |
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| Gene Length | 2421 bp |
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| Protein Length | 806 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637922204 |
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| Product | putative CheA signal transduction histidine kinases |
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| Protein accession | YP_528576 |
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| Protein GI | 90022749 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0643] Chemotaxis protein histidine kinase and related kinases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCATAG ATTTGTCGCA GTTTCATCAA GTCTTTTTCG AAGAAAGCGT AGAAGGCTTG
GATATTATGG AGTCTGCGCT TATGGAGCTA GATCCCACTG ATGTTGATGA CGAAACCATT
AACGCCATTT TTCGCTGCGC GCACTCGATA AAGGGCGGTA GTGCCACATT TAGCTTTAAC
GCCATTTGCG ATTTCACGCA CGTATTAGAA ACACTGTTAG ATCAAGTGCG TTCTGGCCAG
CGCAGTTTAG TGCTGACGCA CGTTAATCTT TTATTGGAAT CGGTGGACTG TTTGCGCGAA
ATGTTAGCCC TTGCGCAAAG TGGCGAATTA GAAAAAACAG AGCAGGCGGC TACGTTGCAA
CGTCAGTTTG AAGCTATTCT CGCTAACGAA GGGCCTGCGC CCGCACAAAA AACTGAGGCT
GCACCCACTG TAAATAGCGA TGCCGATGCC CCGTGGCTAA TAACATTTCA ACCTAGCCTT
GAAATTATGC AAACCGGTAA TGACCCTGCG CGTATTTTGC GGGAATTGCG TAACACAGGT
GCGCTGCAGT TAGTTGCTAA TAGCGACGCG CTACCTGAGT GGGGCGGTTT CGACCCAGAG
CAATGTTACC TATCTTGGCG TGCCAGCGTG CCCGCATCGA TAGAAAAAAA TGCGCTAGAG
GAAGTATTTG AATGGGTGAC CGATTTGGCA GATATTTCGA TTACACGATC GGGTGATTGC
CAACCTTTGG CCATTGATCA ACATGAAAAT AACCATTGCT GGAAAATACA TTTCGTACCC
AGTATCGATG TTATGCGTAC AGGTAACGAC CCGTTGCGTA TTCTCGCAGA GCTAAAGAAT
TTAAGCAGTA CATATCATAG TAAAGCCGAC ACTAAAGGGC TGCCAGATTT TGCCGATTTT
GAGCCAGAAA GTTGTTATTT AGGTTGGGAT ATTAAGCTAG AAGCTAACAC CGAAGTAACC
GAAATAGAAA CCGCTTTCGA ATGGGTGGCC GATGAAAGCC AGTTAACGAT ATCGGCCCTT
GTTGCTGCAC CACGAGAAGA TGGGCAAACA GAAGCCGAGG CGGTTAATTC TAATGAGGCG
AAATTAACAC CTATTTTAGC GCCGGTTTCG GTAGTTGAAC AAAAGGAACC AGTTAAAGCG
AGCAAAGCCA AGCCTGCCAA CAAAGCAAGT ACGGATGCGA CATTTATTCG TGTTGGAATA
GATAAAATCG ACAACCTTAT CAATATGGTG GGCGAGCTTG TTATTACGCA GTCTATGTTG
GGGCAATTAA GTGAAGATGT AGATGTTGCT AAAGTGCCCC GGCTTGTTGA GGGCTTAAAC
CAACTAGAGC AAAACACCCG AGAATTACAA GAAGGCGTAA TGCGTATACG CATGCTGCCT
ATTAGCTTTT CTTTTAATCG CTTTCCACGT TTGGTGCGTG ATTTAAGCCA GCGTTTAGAG
AAGCAAGTCG AGCTGGTAAT ACACGGCGAA AATACAGAGC TAGACAAAAC AGTTATGGAA
AAAATTGGTG ACCCACTGGT TCACCTAGTG CGCAATGCTG TGGATCACGG TATAGAACTG
CCCGCAGCGC GGCTAGCCGC AGGCAAACCA GAAGTGGGCA CCATTACGCT TGATGCCTAC
CATAAAGGCG GCAATATCGT TATTGAAATA AAAGACGACG GCGCTGGTTT GAATCGCGAT
AAGGTTTTGC AAAAAGCGAT AGACAAAAAA ATAATAAGTG CTAGTGATGC AGCAATGATG
ACTGACGAGC AAGTTTACGA TCTTATATTT CAGCCAGGCT TTTCTACTGC CGCAGCGGTT
ACGGATGTAT CTGGTCGCGG TGTAGGTATG GATGTGGTTA AGCGTAATAT TCAAGCTTTA
AATGGCGCTG TCGATATAGC GTCTAAGCTA GGTGAAGGTT CTACTATCAC AATTCGTTTG
CCACTTACCC TTGCTATTCT CGATGGTCAG TTAATTCGCG TTGGCGGCAA TATTTATATT
TTCCCGCTTA TTTCTATTGT GGAATCTATG CAGTGTCGCA GCGAATACGT AAACCAGCTA
GCTGGCGGGC AACAGGTTTT TCGCTTGCGC GATGAATATG TTCCCATTAT CGAGTTAAGT
AAAACCTTTT CTATTCCTTC TGATACCGAT TCGATTGAAG GCGCACTGAT GGTAGTGGTG
GAATTCGATG GTCAGAAGGT TGGGGTAATT GTTGACGAGT TATTAGGCCA GCAACAGGTG
GTAATAAAAA GCTTAGAGCA AAATTACAAA CAGGTTGAAG GTGTTTCTGG CGCAACAATA
TTGGGTGACG GTACGGTGGC GCTTATTTTA GATGTGCAAA GTATTGTCGA CCTGTTTTCT
CAAAAGCTAG TGGTTGCGCA AAATACCAGT ACGCGTGTCG ATGGCTATCA GGTTATGCGC
AGTACAAAAA CGCTAAATTA A
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| Protein sequence | MSIDLSQFHQ VFFEESVEGL DIMESALMEL DPTDVDDETI NAIFRCAHSI KGGSATFSFN
AICDFTHVLE TLLDQVRSGQ RSLVLTHVNL LLESVDCLRE MLALAQSGEL EKTEQAATLQ
RQFEAILANE GPAPAQKTEA APTVNSDADA PWLITFQPSL EIMQTGNDPA RILRELRNTG
ALQLVANSDA LPEWGGFDPE QCYLSWRASV PASIEKNALE EVFEWVTDLA DISITRSGDC
QPLAIDQHEN NHCWKIHFVP SIDVMRTGND PLRILAELKN LSSTYHSKAD TKGLPDFADF
EPESCYLGWD IKLEANTEVT EIETAFEWVA DESQLTISAL VAAPREDGQT EAEAVNSNEA
KLTPILAPVS VVEQKEPVKA SKAKPANKAS TDATFIRVGI DKIDNLINMV GELVITQSML
GQLSEDVDVA KVPRLVEGLN QLEQNTRELQ EGVMRIRMLP ISFSFNRFPR LVRDLSQRLE
KQVELVIHGE NTELDKTVME KIGDPLVHLV RNAVDHGIEL PAARLAAGKP EVGTITLDAY
HKGGNIVIEI KDDGAGLNRD KVLQKAIDKK IISASDAAMM TDEQVYDLIF QPGFSTAAAV
TDVSGRGVGM DVVKRNIQAL NGAVDIASKL GEGSTITIRL PLTLAILDGQ LIRVGGNIYI
FPLISIVESM QCRSEYVNQL AGGQQVFRLR DEYVPIIELS KTFSIPSDTD SIEGALMVVV
EFDGQKVGVI VDELLGQQQV VIKSLEQNYK QVEGVSGATI LGDGTVALIL DVQSIVDLFS
QKLVVAQNTS TRVDGYQVMR STKTLN
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