Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_3054 |
Symbol | |
ID | 3967659 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 3907035 |
End bp | 3907745 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637922151 |
Product | hypothetical protein |
Protein accession | YP_528523 |
Protein GI | 90022696 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.000693301 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCCAGTA TAGAATTATT AAATTTTTCC CAGCACGCCA ACTTAGTCGT AAGCGAGGCC TTCGAATATA CACGCGAAGC CAATAGCAAT ATGGTGCCCG TTCTACTTAG TGAAGTAGGC AGCCTTGCAA CTCACTTTCC ATTGTTTTTA ACCAAGAGCG CTCAAACAGG AGAATTTGTT TGTATAGCCC TTATGGGGTT TTCAGCCGAA GAAAATCTCT ACCTTTTAAA TGGCCTGTGG AACAGTGATG CATTACCCTT AGCATTCGAA CGCTTGCCAT TTCACGTTGG GCCAAACAAT GAAGTGTATA TAGATACCCA CAGCCCATTG GTGTCCCAAC AAGATGGCAA GAAAATCTTC ACCCCTAACG GTGAGCCTTC GAGTTATATG CAAAAAATAT TGCAGTGCTT ATCGTTAATA CACACCGGTC GCGACGACAC CATTGCGTTT GTACAAACAC TACAAGACAT GCAATTAATT GAGCCAGTGC AATTAGATGT CACTTTTTGC GACGGCAGCC AAACAAAAAT GGAAGGGTTA TACACGGTTA GCGACCAGCG TTTAAATAGC CTGTCGGCGC CATTACTAGA CACCCTAAAT AAACGCGGCT ACCTGAGTGC AGCCATAGTA ATGAACCACT CTATGGGGCT AGTACAACAA TTGATTAAAA AGAAAAACAC TCAACTAGAA ACCGTAATGT GTGAGAGTTA A
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Protein sequence | MASIELLNFS QHANLVVSEA FEYTREANSN MVPVLLSEVG SLATHFPLFL TKSAQTGEFV CIALMGFSAE ENLYLLNGLW NSDALPLAFE RLPFHVGPNN EVYIDTHSPL VSQQDGKKIF TPNGEPSSYM QKILQCLSLI HTGRDDTIAF VQTLQDMQLI EPVQLDVTFC DGSQTKMEGL YTVSDQRLNS LSAPLLDTLN KRGYLSAAIV MNHSMGLVQQ LIKKKNTQLE TVMCES
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