Gene Sde_3049 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_3049 
Symbol 
ID3967654 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp3900140 
End bp3900952 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content50% 
IMG OID637922146 
Productmolybdopterin biosynthesis MoeB protein 
Protein accessionYP_528518 
Protein GI90022691 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1179] Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000773943 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACAGATA CCACTGCACC ACTTTCCGAA AATTACCTCT ACCGCTTTGG CGGCATAGCG 
CGCCTATACG GCCGCGATGG CCTAGAAGCG CTGCACCGCG CGCACTTTGT GGTAGTGGGG
TTAGGGGGCG TTGGCACGTG GGTAGCAGAA GCCCTAGCGC GCACGGGTGT AGGTGAGCTT
ACCCTTATAG AATTGGATGA AATTTGTGTA ACCAACACCA ACCGCCAAAT ACACGCGTTG
GCCAGTAATG TTGGCCGCAG TAAAAACACC GCTCTTGCAG AGCGCTTACT CGATATAAAC
CCAGAACTAA AAATTCACTC TGTACACGAC TTTCTTACCC AGAAAAACTT GCCCGACCTT
ATTGGTAAGC AACACCACGT GGTAATAGAC GCTGTAGACT CATCCTCAGT AAAAGCGGCA
CTAGTGGCTT ACTGTAGTCG CAATAAAATT CGCTTAATTA TGTCTGGCTC GTCGGGAGGG
AAACGCGACC CATTAAAAAT AACCATCTCA GATTTGGGCC AAACTATTTG CGACCCCATG
TTGGCAAAGG TACGCAATAT TCTCTACCGC CACTACAAGT TCACTAAAAG CAGTAATCGC
CAGTTTAGGG TAGATGCCGT TTATTCGACC GAACAAATGG TATACCCCAA ACCAGACGGC
AGTGTTTGCC AAGAAAAAAA GGGGCTGCAA GATGGGGTTA AACTCGATTG CGCTGGCGGC
TTTGGCTCGG CCACCATGCT TACCGGTAGT TTCGGTTTTG CCGCGGCCAA CAAAGCCATA
GAGCGCTATT TAGCAAGCGC GCTAACCAAA TAA
 
Protein sequence
MTDTTAPLSE NYLYRFGGIA RLYGRDGLEA LHRAHFVVVG LGGVGTWVAE ALARTGVGEL 
TLIELDEICV TNTNRQIHAL ASNVGRSKNT ALAERLLDIN PELKIHSVHD FLTQKNLPDL
IGKQHHVVID AVDSSSVKAA LVAYCSRNKI RLIMSGSSGG KRDPLKITIS DLGQTICDPM
LAKVRNILYR HYKFTKSSNR QFRVDAVYST EQMVYPKPDG SVCQEKKGLQ DGVKLDCAGG
FGSATMLTGS FGFAAANKAI ERYLASALTK