Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_2970 |
Symbol | |
ID | 3967809 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 3773750 |
End bp | 3774982 |
Gene Length | 1233 bp |
Protein Length | 410 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637922067 |
Product | formamidase |
Protein accession | YP_528439 |
Protein GI | 90022612 |
COG category | [C] Energy production and conversion |
COG ID | [COG2421] Predicted acetamidase/formamidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.231861 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGAAA CTATCATTAA GGTTGATTTA AAAGAGTCGC CCTACACCAA CGAGAAAATT CACAACCGCT GGCACCCTGA TATTCCCATG GCAGTAAAAG TAAAGCCTGG GGATGATTTT AAAATCGAGT GCTACGATTG GACCGGTGGT CAAATAGAAA ACAACGACGA CGCAGCCGAT GTGCGCGATG TAGATCTAAG CCAAGTGCAT TTTTTGTCTG GCCCTGTTGG GGTTGAGGGC GCAGAGCCGG GCGATTTGTT GGTGGTAGAT ATTCTCGATA TAGGCGCTTT CGACGAAAGC TTGTGGGGCT TTAACGGTTT CTTTTCTAAA AAGAATGGCG GCGGCTTTTT AACCGATCAC TTCCCCGAAG CGCAAAAATC CATTTGGGAT ATAAACGGTA TGTTTACTAA ATCACGGCAC GTGCCAGGGG TTGAGTATGC GGGGTTAATT CACCCAGGTT TAATAGGTTG CTTGCCATCT AAAGAATTGC TTGATGAATG GAATACACGC GAAAAAGCAC TGTACGATAC CGAGCCAGAT AGAACGCCAG CTCTTGCTAC CTTACCTTAC GCAGAAACCG CCCATATGGG TACAATGCAG GGCGATGCAA AAGAAAAAGC CGCAGCAGAG GGGGCGCGTA CGGTTCCACC GCGGGAGCAC GGCGGCAACT GCGATATTAA AGATTTATCG CGCGGCTCCA AAATTTACTT TCCGGTTTAT GTAAAAGATG CAGGGCTATC TGTAGGGGAT TTGCACTTTA GTCAAGGCGA CGGCGAAATA ACTTTTTGCG GCGCTATCGA AATGGCTGGT TGGATACACC TACGTGTAAA TCTTATTAAA GGCGGCATGG AAAAATACGC CATTAAAAAC CCTATTTTTA AACCTAGCCC CATCACGCCT AAATACGACG ATTACCTAAT ATTTGAAGGT ATATCGGTAG ATGAAGGCGG TAAGCAGCAT TATTTAGATG TGCACGTGGC TTACAGGCAG GCTTGTTTAA ACGCTATTAA TTATTTAGAG AAGTTTGGTT ACTCGCGCGC GCAGGCTTAC GCCATTTTGG GTACGGCGCC GGTGCAAGGG CATATTAGTG GTGTGGTGGA TATACCCAAC GCGTGCGCAA CGCTTTGGTT ACCTACCGAT ATCTTTGAAT TTAATGTGCA GCCGGGGGCA GACGGGCCAA CAGTGGAGTT AGACGGCTCT GTTCAGGTTC CGCTGGCACC AGACTTAGAG TAG
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Protein sequence | MAETIIKVDL KESPYTNEKI HNRWHPDIPM AVKVKPGDDF KIECYDWTGG QIENNDDAAD VRDVDLSQVH FLSGPVGVEG AEPGDLLVVD ILDIGAFDES LWGFNGFFSK KNGGGFLTDH FPEAQKSIWD INGMFTKSRH VPGVEYAGLI HPGLIGCLPS KELLDEWNTR EKALYDTEPD RTPALATLPY AETAHMGTMQ GDAKEKAAAE GARTVPPREH GGNCDIKDLS RGSKIYFPVY VKDAGLSVGD LHFSQGDGEI TFCGAIEMAG WIHLRVNLIK GGMEKYAIKN PIFKPSPITP KYDDYLIFEG ISVDEGGKQH YLDVHVAYRQ ACLNAINYLE KFGYSRAQAY AILGTAPVQG HISGVVDIPN ACATLWLPTD IFEFNVQPGA DGPTVELDGS VQVPLAPDLE
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