| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2922 |
|---|
| Symbol | |
|---|
| ID | 3968051 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharophagus degradans 2-40 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007912 |
|---|
| Strand | + |
|---|
| Start bp | 3705831 |
|---|
| End bp | 3707078 |
|---|
| Gene Length | 1248 bp |
|---|
| Protein Length | 415 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 637922019 |
|---|
| Product | GAF sensor signal transduction histidine kinase |
|---|
| Protein accession | YP_528391 |
|---|
| Protein GI | 90022564 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCACT ACCCGGAGTT TGTCGAGAAC AGAAAATATT TAGAAATGGA TAGCTCTGTT
CCCGAGCGGG AGCAACTGTG GGCCATGTTA AATAATCTCA CGCGCATCCA TTTGCTAACC
GCAGACAAAT TTAATAGTTT TGACAGCCTT ATTAGGGAAT ATTTAATTTC TGGCTGCGAA
GTATTTGGCT TAGAAACAGG CATAGTGAGC GAAGTCACCA GCGCAGGTAG CTACATAGTA
AAAGATGTAG TAAGCCCCTT AGATGTATTG GAAAAAGGGC AGGAGTTTGC ACTAGAAGAT
ACCTACTGCA GAGAAGTAAT AAAAAGCCGC ACCGTGCTCG GGTTCCCTGA AGTTGGCAGG
CTAGATTACA TGAACTGCCA CCCCGTATAC CAAAACCTTA AGCTCGAAGC CTATTTATCG
GCCCCTATAT TTGTAGATGG CAACCTGTAC GGCACGCTCA ACTTTACCTC TACCCAGCCC
CGCTACAAGG GCTTTTCTAG TCACGAGCGC GATTTAATAA CGCTTATGGC GAATGCAATT
GGCAATTTTA TTTTACTGCG CCAAAAAGAA GCCAAATTAG TCAACCTAAA TAAACGCATT
AAAAAGTTTG CAGCCTATGT TGCCCACGAT TTGCGCAACC CCATAGGTAG CATTATTGGC
CTCGCACAAA TGGGCACAAA GCCCACTACA ACAGACAAAA GGCGTATAAG CATTCTGGAA
AAAATTCTCC CCACGGCCAC CACTGCCCTA GAATTTGTAA ACTCACTACT GGAAAATGCA
GCGCTAAGCA GCGGCAAAAT AAGCCCCAAG CTCACCACCA ACAACCCTGC AACACTGTTA
CAAAGCGCCG CAACCAAGGT AACGGCACTA CTTAAAGAGT CATGCAATAC GGTGGAATAC
AGCCATACCC ACACCAACTT GGTTAGCTGC GATAGCGACC GCATTCAACA GGCGCTGGTT
AACCTTTTAA CCAATGCAGC CAAGTACTCA CCAGAAAATA CGCCCATTCA AATTGCAACC
TATGACACGA ACGATACAAC AACTTTTGAA ATCAAAAACA CCATTGCAGT AATACACACG
CAAAACGCCA ACGAACAGCA CAGCACATCT GTTTATGGCT CTACGGGTTT TGGTTTAGAT
ATTGTAAATG AGATTCTTGA CGTGCACGGC AGCACACTAA CAATTCAAAA TGACGGTAAA
GTCTACACTG CACTATTTGA CCTACAAGCC GCAACTTCGC ATAAGTAA
|
|---|
| Protein sequence | MTHYPEFVEN RKYLEMDSSV PEREQLWAML NNLTRIHLLT ADKFNSFDSL IREYLISGCE
VFGLETGIVS EVTSAGSYIV KDVVSPLDVL EKGQEFALED TYCREVIKSR TVLGFPEVGR
LDYMNCHPVY QNLKLEAYLS APIFVDGNLY GTLNFTSTQP RYKGFSSHER DLITLMANAI
GNFILLRQKE AKLVNLNKRI KKFAAYVAHD LRNPIGSIIG LAQMGTKPTT TDKRRISILE
KILPTATTAL EFVNSLLENA ALSSGKISPK LTTNNPATLL QSAATKVTAL LKESCNTVEY
SHTHTNLVSC DSDRIQQALV NLLTNAAKYS PENTPIQIAT YDTNDTTTFE IKNTIAVIHT
QNANEQHSTS VYGSTGFGLD IVNEILDVHG STLTIQNDGK VYTALFDLQA ATSHK
|
|---|
| |