Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_2903 |
Symbol | |
ID | 3968071 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 3681760 |
End bp | 3682455 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637922000 |
Product | hypothetical protein |
Protein accession | YP_528372 |
Protein GI | 90022545 |
COG category | [R] General function prediction only |
COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 49 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.216925 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTAGATC TCGAAGAAGA TTTGTCTGTG CTTACGCCCG CACAGCTTTA TACTTTGGCA ATACAATATG AGCGTGGTGA AGGTGTAGAG AAAGATATGC AAAGGGCGGT AGATCTCTAC GAGCGCAGCG CACAAAAAAA TCATTTAGAT GCTCAGTTTA CTCTCGGCAT TTTATATATG CAGGGGGTGG GTGTTGAGCA AGATGTGGAT GATGCGCTCT ACTGGTGGAA AAAGGCCGCT AGGGCAGGGC ACGATAAGGC GCAGTTCAAT CTGGGTGTAA GTTTCTACAA CGGCCATCGC GGTAAACCCG ATTACGCTGA AGCGGTTAGA TGGTTAGAGA AATCTGCACG CGGCGACAAT ACCCGCGCTA TGTTTTTTCT TGGGCGCGAA TACTACACGG GTAAAAATAT TCCTCAAGAT TTTGTGCTAG CACACAAATT ACTACTAAAA GCCGCAAATA AAAATTTGTT AGATGCACAA GTAGATATTG GTTTGATGTA CGCGCTTGGT CAGGGTGTTC GCACACCAGA CCCAGTATCT GGTTTCGCAT GGGTGAAGGT GGCGGCCGAT CAGGGGGCGG AAAATGCGAA AACCGTATTG GATGCCTTCG ATAAAGATTT TAATTTTACC CAAGCAAATA GAGAAAAAGC AGAGCGTCTA GCCGCTAGTT TGTTAGCTAA AGTCATTAAG GTTTGA
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Protein sequence | MLDLEEDLSV LTPAQLYTLA IQYERGEGVE KDMQRAVDLY ERSAQKNHLD AQFTLGILYM QGVGVEQDVD DALYWWKKAA RAGHDKAQFN LGVSFYNGHR GKPDYAEAVR WLEKSARGDN TRAMFFLGRE YYTGKNIPQD FVLAHKLLLK AANKNLLDAQ VDIGLMYALG QGVRTPDPVS GFAWVKVAAD QGAENAKTVL DAFDKDFNFT QANREKAERL AASLLAKVIK V
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