Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_2879 |
Symbol | |
ID | 3968105 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 3648276 |
End bp | 3649121 |
Gene Length | 846 bp |
Protein Length | 281 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637921976 |
Product | hypothetical protein |
Protein accession | YP_528348 |
Protein GI | 90022521 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.0257502 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00113729 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCCATTG CCGGGTGTGC ATGTGTTTGG GGGGCTGTGA GTGCGCAAGC ACAAACACAG CTTACCTACG CAGTTACGGA TGATGCCAAA GAAGTGCTTA TTGGCAATAT ATTAAAGTTA GCTATAGAAA AAAGCGGTCG CGGCGGTGAG TTTACTCACA ATGTGCGCAA CGAAAGCCTT ACCGAAACCC GTCTTGTTGA AAGTGTTAAA ACCGGTAGCA TTACCGTTAT GTGGGCCGGT ACGCAAAAAG AGTACGAAGA GCAGTTATTA CCTATTCGCA TACCTCTATT CAAGGGCTTG TTAGGCCACC GAATATTTAT TATTCGCCAG GGGGATCAGT CGAGATTTGA TAGAGTGCAA ACCTTAGAAG ACTTGCGTCA AATTCCCTTG GGGCAAGGCC GCGAGTGGGG CGATACGGTT GTATTGAAGG CCGCAAACTT AAATGTGGTT GCACCATTAA AATACGAAAG CTTGTTTCAC ATGTTAGATG GCGGTCGCTT TGATGCATTC CCTAGGGCTG TGCACGAGCC TTGGAGTGAA GTAACCAGCC GACCAGATTT AAACCTAACA ATTGAAAAGC GAATTTTATT GGTTTACCCC TTTGCAATGT ATTTTTTTGT GTCTAAAGAT AACCACCAAT TAGCTAAAGT TATTGAGCAA GGTATGCGTA ATGCAATTGC CGATGGCAGC TACGACGACA TATTTTTTGC CAACCCTGTT ATTAAAGACG CGTTAGATAG GGCTAACCTA CAAGAGCGTA AAATATTTAG GTTAAGTAAC CCCAATATGA GCCCGCTTAC ACCTTTCGAC GATAAATCCC TTTGGCTTAA CCTAGAAGAT TTATAG
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Protein sequence | MAIAGCACVW GAVSAQAQTQ LTYAVTDDAK EVLIGNILKL AIEKSGRGGE FTHNVRNESL TETRLVESVK TGSITVMWAG TQKEYEEQLL PIRIPLFKGL LGHRIFIIRQ GDQSRFDRVQ TLEDLRQIPL GQGREWGDTV VLKAANLNVV APLKYESLFH MLDGGRFDAF PRAVHEPWSE VTSRPDLNLT IEKRILLVYP FAMYFFVSKD NHQLAKVIEQ GMRNAIADGS YDDIFFANPV IKDALDRANL QERKIFRLSN PNMSPLTPFD DKSLWLNLED L
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