Gene Sde_2879 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_2879 
Symbol 
ID3968105 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp3648276 
End bp3649121 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content44% 
IMG OID637921976 
Producthypothetical protein 
Protein accessionYP_528348 
Protein GI90022521 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0257502 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00113729 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCCATTG CCGGGTGTGC ATGTGTTTGG GGGGCTGTGA GTGCGCAAGC ACAAACACAG 
CTTACCTACG CAGTTACGGA TGATGCCAAA GAAGTGCTTA TTGGCAATAT ATTAAAGTTA
GCTATAGAAA AAAGCGGTCG CGGCGGTGAG TTTACTCACA ATGTGCGCAA CGAAAGCCTT
ACCGAAACCC GTCTTGTTGA AAGTGTTAAA ACCGGTAGCA TTACCGTTAT GTGGGCCGGT
ACGCAAAAAG AGTACGAAGA GCAGTTATTA CCTATTCGCA TACCTCTATT CAAGGGCTTG
TTAGGCCACC GAATATTTAT TATTCGCCAG GGGGATCAGT CGAGATTTGA TAGAGTGCAA
ACCTTAGAAG ACTTGCGTCA AATTCCCTTG GGGCAAGGCC GCGAGTGGGG CGATACGGTT
GTATTGAAGG CCGCAAACTT AAATGTGGTT GCACCATTAA AATACGAAAG CTTGTTTCAC
ATGTTAGATG GCGGTCGCTT TGATGCATTC CCTAGGGCTG TGCACGAGCC TTGGAGTGAA
GTAACCAGCC GACCAGATTT AAACCTAACA ATTGAAAAGC GAATTTTATT GGTTTACCCC
TTTGCAATGT ATTTTTTTGT GTCTAAAGAT AACCACCAAT TAGCTAAAGT TATTGAGCAA
GGTATGCGTA ATGCAATTGC CGATGGCAGC TACGACGACA TATTTTTTGC CAACCCTGTT
ATTAAAGACG CGTTAGATAG GGCTAACCTA CAAGAGCGTA AAATATTTAG GTTAAGTAAC
CCCAATATGA GCCCGCTTAC ACCTTTCGAC GATAAATCCC TTTGGCTTAA CCTAGAAGAT
TTATAG
 
Protein sequence
MAIAGCACVW GAVSAQAQTQ LTYAVTDDAK EVLIGNILKL AIEKSGRGGE FTHNVRNESL 
TETRLVESVK TGSITVMWAG TQKEYEEQLL PIRIPLFKGL LGHRIFIIRQ GDQSRFDRVQ
TLEDLRQIPL GQGREWGDTV VLKAANLNVV APLKYESLFH MLDGGRFDAF PRAVHEPWSE
VTSRPDLNLT IEKRILLVYP FAMYFFVSKD NHQLAKVIEQ GMRNAIADGS YDDIFFANPV
IKDALDRANL QERKIFRLSN PNMSPLTPFD DKSLWLNLED L