| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2877 |
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| Symbol | |
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| ID | 3968103 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 3644213 |
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| End bp | 3644923 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637921974 |
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| Product | hypothetical protein |
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| Protein accession | YP_528346 |
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| Protein GI | 90022519 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02595] PEP-CTERM putative exosortase interaction domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 0.848063 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.00421262 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAGAAAT TTACATCAGT GTTAGGCGCT ATTGCGCTAT GTGTGGCACC TTCTGCGTTT
GCAACTGTTA TAGATTTTAA CGATGTAGCA GAGGGCACAA TTGTCGATAA CGAGTATGCT
GCGTACGGCG TTACTTTTAA TGGTGTGAAC GTAGACCGCA ATGTGTCTAA TCTTGCTGTT
GCATTCGATA CCACCAACCA AAACAGCCGC GACCCAGACC TGGAAGCACC ATTTTATAAT
GTGGTAAACC CAAGCCTTGG TACTGCTAAC CCAGGCAATG TTTTAATCAT CCATGAGCAC
CCAAGCACTT GTGATGGCTC TACCTGTGCT AACCCCGATG ATGAGGGTTC ACAGCCTGCC
GGTTACTTCG AAATTAATTT TAGTACTGGT GTTACTCTAA ATAGCTTAGA TTTCTTCGAT
ATCGAAGATG CCGAAAATGG CTACACAGCA AACAATGCTA TTCACTTGTT CGATATTAAT
GGCGACGAGA TCCAGGCGGG TAATTTCTTT ACCCCTCACA CCGGTGGTGA TAATACTTGG
GATCGTTTGT ACTTTAATGT GGCGGGTGTG TACTCAATGC AAATAGGCCT TAAAGGTTCT
GGCGCCATCG ATAACCTTAA CTTCTCTGTT CCAGAGCCAA GCACTATTAT GCTATTTGGC
TTGGGCTTGA TTGGTTTAGG CTTAAGCCGT CGTAAGTTAT CTGCTAAATA A
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| Protein sequence | MKKFTSVLGA IALCVAPSAF ATVIDFNDVA EGTIVDNEYA AYGVTFNGVN VDRNVSNLAV
AFDTTNQNSR DPDLEAPFYN VVNPSLGTAN PGNVLIIHEH PSTCDGSTCA NPDDEGSQPA
GYFEINFSTG VTLNSLDFFD IEDAENGYTA NNAIHLFDIN GDEIQAGNFF TPHTGGDNTW
DRLYFNVAGV YSMQIGLKGS GAIDNLNFSV PEPSTIMLFG LGLIGLGLSR RKLSAK
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