Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_2866 |
Symbol | |
ID | 3968131 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 3626029 |
End bp | 3627018 |
Gene Length | 990 bp |
Protein Length | 329 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637921963 |
Product | D-lactate dehydrogenase |
Protein accession | YP_528335 |
Protein GI | 90022508 |
COG category | [C] Energy production and conversion [H] Coenzyme transport and metabolism [R] General function prediction only |
COG ID | [COG1052] Lactate dehydrogenase and related dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.868675 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.72546 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAATAG GTCTTTTTAG CAGTAAAAAG TACGATAAAG TTGTTTTTCA TCAAATAAAC TCTGGGCAAC ATGAAATAAC TTATCACCCT GTTAGGCTCA ACAAAGATAC GGTGAAGTTA GCAAGCGGAT TTGAAGCTAT ATGCTGCTTC GTTAATGATG AGATTGACGC CTCTGTGATC GCAAGCCTAA GCAACATGAA TGTAAAGCTG CTTGCCCTGC GATGCGCCGG TTTTAATAAT GTTGATTTAC CTGCCGCGAA AGCCAATAAC TTGCCTATTT GCCGAGTACC AGAATATTCG CCCCACGCCG TAGCGGAGCA TACTTGCGCA CTAATATTAG ATTTAAACCG TAACATCCAC CGCGCTCATA ATCGCATACG GGAAAACGAT TACTCTTTGG ACGGGCTTTT GGGTTTCGAC TTACATGGAA AAACGGTGGG AGTGATTGGG GCGGGTAAGA TTGGTCGTGC CTTTATCAAA ATCATGCTTG GTTTTGGTTG TAACATACAA GTGTGTGACC CCGATTATGC CCAGCCGGAC AATCCCAAAA TAAAAAAAGG GGACTTGGAT GACGTGCTGC AAAACTCGAA CATTATTTCG CTACACTGCC CGTTGGTGCC AAGTACACAT CACATGATCA ACCAAGCGGC CATAGATAAA ATGAAACCAG GTGTAATGTT AATTAATACG AGCAGAGGGG GATTAGTGGA TACCTCGGCG GTTATACGTG CATTAAAGAA CAAAAAAATA GGTCATTTGG GGTTGGATGT ATACGAAGAA GAAAGTGAAA TGTTTTTTGA AGACTTTTCT GACACCTTCA TTCAAGACGA TGTATTTGCC CGCCTACAGA CTTTCCCTAA TGTAACCATT ACAGGCCATC AAGCATTTTT CACCAAAGAG GCTTTAGAAA AAATAGCCCG TACAACCTTA ACTAACATCG AGCACTTTCA GCGCGGCGAG TTTGATAAAG TTCATTTTGT TTCCACTTAA
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Protein sequence | MKIGLFSSKK YDKVVFHQIN SGQHEITYHP VRLNKDTVKL ASGFEAICCF VNDEIDASVI ASLSNMNVKL LALRCAGFNN VDLPAAKANN LPICRVPEYS PHAVAEHTCA LILDLNRNIH RAHNRIREND YSLDGLLGFD LHGKTVGVIG AGKIGRAFIK IMLGFGCNIQ VCDPDYAQPD NPKIKKGDLD DVLQNSNIIS LHCPLVPSTH HMINQAAIDK MKPGVMLINT SRGGLVDTSA VIRALKNKKI GHLGLDVYEE ESEMFFEDFS DTFIQDDVFA RLQTFPNVTI TGHQAFFTKE ALEKIARTTL TNIEHFQRGE FDKVHFVST
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