Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_2853 |
Symbol | |
ID | 3968118 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 3607571 |
End bp | 3609829 |
Gene Length | 2259 bp |
Protein Length | 752 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637921950 |
Product | isoquinoline 1-oxidoreductase, beta subunit, putative |
Protein accession | YP_528322 |
Protein GI | 90022495 |
COG category | [C] Energy production and conversion |
COG ID | [COG1529] Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs |
TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.292971 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGCAAA TTATTAATGT TAATCGACGC CGGTTTTTAA AAGCCACTGG TGTAGCGGGC GGTGCATTTA TTTTGGGGGC TGCAATACCA GGGCTAAGTA TCGCAGCGGG TAATAATGCA CACCAAGCAA GTGCCGAGCT AGGGGTGTTT GTGAGTATAG AATCCAACGG TGCCGTAAAA ATATTTTGTC ATCGAATGGA AATGGGCCAG GGCATATTAA CCAGCGTGCC GCAAATAATC GCCGATGAGT TGGAAGCCGA TTGGCAAAAA GTAACTGCGC AATTGGCACC GGGCGACAGT AAATTTGGCG ATCAAAGCAC CGGCGGTTCG GCTTCTATTC GTCGCTTTTT TACCTATACG CGACAAATGG GCGCAATAGC GCGCGATATG CTTGAGCAAG CGGCAGCCAA TGCCTGGCAA GTAGATAAAA CGGCGGTTAA AGCGCAAAAG CATTATGTGG TGCATACCGC GACGGGTAAA AAATTAGGTT TTGGTGAGTT GGCAAGTGCT GCGGCAAAAC TACCTGTACC CGATAGAGAA AGCGTAAAAC TAAAAGCGAA CAAAGATTTC TCGCTTATAG GTAAAGACGT AGCCCTACAG GGGCAGGCCG ATATTGTGCA AGGCAAGGCA ACATACGCGC ACGATATACA GCTACCTAAT ATGCTTATTG CCAGCATACA GCGACCACCA GTATTGTTAG GTAAGGTGAA AAGCTTTGAT GCAACCGAAG CAAAAAAAGT AGCGGGTGTG GTGGATGTAA TTCAGTTGCG AGATAGAAGC TTACCCGTGT TAACGAATCC AGTTTCAGGT GTTGCTGTAT TAGCAACCAA TACCTGGGCA GCATTAGAAG GCCGCAAGAA ACTAAAAATA GAGTGGGACT TGGGCGAAAA CGTAAGTCAC AATTCCGACG CCTATATGCA AGATCTTGTT AAGAAAGTGA GCGAAAAAGG TATTTCTGTT CGCACAGAAG GTGACGTGTA CAGCCATGCT TATAATGCCG AGCGCACCGT AGAGGCGGTA TACACTTTTC CATATCATCA CCATATGTCT ATGGAAACGC CTGCTGCAAC TGCCGTTATT GAAAATGGTA TTTGCACTGT TTGGGCTGGT ACTCAAACAC CGCAATGGGG TAAAGGCATG GTGTTTCAAG AGCTAGGCCT CGACCCAGAA AAAGATGCCG ACAAAGTTGT TTTTAACACT ACATTAATGG GTGGCGCTTT TGGTCGCAAA GGTAAAAATG ACTTTACTAT TGAAGCTGTA GAGCTGGCCA AAGCGAGTGG CCGCCCAGTT AAAGTTGTTT GGAGCAGGGA AGATGACGTT AAGCACGGTT TTTATCACTC CCCTTCGGCC AATTATTACA AGGCAGAATT AACAAAAGAT AATCGTGCCG AGTATGTGAT TGCACGTGTT GCGCACCCGC CAATAGGGTG GATTTTTAAT CACCAAACCG ATACCCCCGG TAACATGTTG TTGTCGCAAA GTTTTGGCGA CTTACCTTTC GCTGTGGATC ACCTAAGCGT AGAAACACAA AAAGTGTCTA CACATCTTCG CATAGGGTGG TTTCGCGCGG TACAGAATAT TCACAATGCC TTTGCTATGG GCTGTTTTGT TGATGAGCTG GCCGCAAAAG CAAAAATTAG CACGCGCAAA ATGTGGATGA ACTTGCTGGG CGACGATCGC ATTGTAAACC CTGCGCAAGA GGGCTTTGAC GGCTGGGTGA ACTATGGCCA ATCTACCCCC GCATACGCAG TAAACACTAA ACGTATGAAA AACGTAATTA ACCTTATTGC GGATAAGGCG GGTATTGATA AAAAATTACC CGCTAACGAA GGTTGGGGTA TTGGCTACGC CACAAGCTTT AACTCTTACG CTGCAGCCGC AACTAAAGTG CGTGTGGTGG AAGACAAAGT TGAAGTGTTG GAAATGCACA CGGTAATAGA CTGCGGCTTA GTAGTTACAC CCGATAGAGT GAAATCGCAA ATGGAAGGCG CCATGATTAT GGGGCACTCG TTAGCTTTGT TTAGCGCAAT TACGGTGAAA GATGGTGAAG TGGAGCAAAG TAATTTTCAC GATTATTCTG TTTCGCGAAT TAATCAAATT CCGCCGTTAT TTGTACACTT AGTCGAATCG GATGAGGCGC CAGGTGGTGT AGGCGAGCCA GGTTTGCCAG CTGTGGTACC GAGTATTGTA AACGCTATTT ACCATGCTAG CGGCAAACGC ATTAGAGATT TACCTGTAAA TAAAGTGCTT AAAGTTTAG
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Protein sequence | MSQIINVNRR RFLKATGVAG GAFILGAAIP GLSIAAGNNA HQASAELGVF VSIESNGAVK IFCHRMEMGQ GILTSVPQII ADELEADWQK VTAQLAPGDS KFGDQSTGGS ASIRRFFTYT RQMGAIARDM LEQAAANAWQ VDKTAVKAQK HYVVHTATGK KLGFGELASA AAKLPVPDRE SVKLKANKDF SLIGKDVALQ GQADIVQGKA TYAHDIQLPN MLIASIQRPP VLLGKVKSFD ATEAKKVAGV VDVIQLRDRS LPVLTNPVSG VAVLATNTWA ALEGRKKLKI EWDLGENVSH NSDAYMQDLV KKVSEKGISV RTEGDVYSHA YNAERTVEAV YTFPYHHHMS METPAATAVI ENGICTVWAG TQTPQWGKGM VFQELGLDPE KDADKVVFNT TLMGGAFGRK GKNDFTIEAV ELAKASGRPV KVVWSREDDV KHGFYHSPSA NYYKAELTKD NRAEYVIARV AHPPIGWIFN HQTDTPGNML LSQSFGDLPF AVDHLSVETQ KVSTHLRIGW FRAVQNIHNA FAMGCFVDEL AAKAKISTRK MWMNLLGDDR IVNPAQEGFD GWVNYGQSTP AYAVNTKRMK NVINLIADKA GIDKKLPANE GWGIGYATSF NSYAAAATKV RVVEDKVEVL EMHTVIDCGL VVTPDRVKSQ MEGAMIMGHS LALFSAITVK DGEVEQSNFH DYSVSRINQI PPLFVHLVES DEAPGGVGEP GLPAVVPSIV NAIYHASGKR IRDLPVNKVL KV
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