Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_2852 |
Symbol | |
ID | 3968117 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 3606336 |
End bp | 3607484 |
Gene Length | 1149 bp |
Protein Length | 382 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637921949 |
Product | hypothetical protein |
Protein accession | YP_528321 |
Protein GI | 90022494 |
COG category | [S] Function unknown |
COG ID | [COG4102] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAACGCC GCAAACTTAT AACACTTTTT GGAACAAGCT TACTGTTGTG GCAAACTCCT TTGCTTGCGG CCGCACCCAG TAGCATTGAT AAACCCGACA ATAAAAGCCC CAGTAAAAAA TCCAATAAAA AGCCCAGCAA AAAAATAGTA TGGATAATGC TGCGTGGCGC AATGGATTCC CTGCACGCGG TGGTACCACC TATAGATGAT GATTTACTGA AGCTGCGCAA AGAATTAGTT GAGCCTATAG CCAATACGCT ACAACCACTA GAAAAAGGGT TTGGCCTCCA CCCAGACTTG GCTTTTTTTC ATAAACTATA CAAACAAAAA CAGCTTAGCC CCGTAGTCGC TACTGCAACA CCCTACAGGC AGCGCTCGCA CTTTGACGCG CAGGATTTTC TAGAAAGTGC CACCACGCCC ACAAATCACA ATAATGGTTG GCTGGCTCGC ACAGCGCAGC AATACAATGG CGACGCTATT GCCATTGCAC AGTCTACGCC TATTTCTTTG CGCGGCGAGA TCGCCGCGCG CTCTTGGTAC CCCTCTTCGC TGCCAGAAGC AGAGGATGAC CTATACAATC GTTTAGCAAC AATGTACGAA AACGATGCTG AGCTTTCCAA TTCGCTAAAC CAAACCTTAG ATACGCAAAA CATGGTGGGA GACTTAGCAA CCAATAAGCG CCCCAAGCTA CCCGAACTTG CACGGGCCTG CGCTACCTTA TTGAAAGAAA ACAACCAATT AAACTTTGCC ATGATAGAAA TGGGCGGTTG GGATACGCAC AACAACCAAG TGCGCCGCTT AAGTGTTGCC TTTAAAGAAT TAGATGCAGG CTTACAAATA TTGCACGATC AATTGGGTGA GGCTTGGCAG GATACTCTGG TAATTATAGC TACCGAGTTC GGCCGCACGG CTAAAATTAA CGGCACCAAA GGCACCGACC ACGGTACAGC GAGCGCTTTA TTTTTTGCGG GAGGAAGCTA CCAAGGTGGC GATGTAAAAG GTAAGTGGCC GGGCCTGGCA AGCAATCAAC TTTACCAAGC CCGCGATTTA ATGCCCACAT CCAATACATT CGACTGGATA AACCAAAGCA TTCAAAGCCA CTTAAACCTA ACAACAACTC AAATGAATCA AGTTTTCCCA ACAATTTAG
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Protein sequence | MQRRKLITLF GTSLLLWQTP LLAAAPSSID KPDNKSPSKK SNKKPSKKIV WIMLRGAMDS LHAVVPPIDD DLLKLRKELV EPIANTLQPL EKGFGLHPDL AFFHKLYKQK QLSPVVATAT PYRQRSHFDA QDFLESATTP TNHNNGWLAR TAQQYNGDAI AIAQSTPISL RGEIAARSWY PSSLPEAEDD LYNRLATMYE NDAELSNSLN QTLDTQNMVG DLATNKRPKL PELARACATL LKENNQLNFA MIEMGGWDTH NNQVRRLSVA FKELDAGLQI LHDQLGEAWQ DTLVIIATEF GRTAKINGTK GTDHGTASAL FFAGGSYQGG DVKGKWPGLA SNQLYQARDL MPTSNTFDWI NQSIQSHLNL TTTQMNQVFP TI
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