| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2818 |
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| Symbol | |
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| ID | 3968221 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 3555400 |
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| End bp | 3556059 |
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| Gene Length | 660 bp |
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| Protein Length | 219 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637921915 |
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| Product | hypothetical protein |
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| Protein accession | YP_528287 |
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| Protein GI | 90022460 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 0.654344 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00000214604 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAACTATA AAGCAAATAT TAAACGGCGC GTAAGTTGGC CGTCAAAATT GCAATTACAA
GCAAGCTTGC TAAGCCTAGG CATTCTAAGC GCTGCTTTAT TTTTGCTGTG GCTAGGCCAA
TGGCTGCAAT TTACAGTAGA AGACAAAATA GAAATTCGTG AAATTGCTAT CGCAACACCG
CCTCCTCCAC CACCACCGCC CCCCACATTG GAGCAACCAG TAGTAGAAAC GCCAATTACC
TTACAAGTAG AAGGCACAGG CCCCTCGCTT GAAACCATCA AGCTTGAGCC AAAATTTACT
TTAAAAAAAC CAGATACCCC CACCATTAAT ACTCAGCAAA CCCAATGGCA ATCTCTAGAA
ATAGATTGGG ATGCATTGAG CTTAAACGAC CTAGACGGCT TACCCTCGCT GCTTACACAG
CTGCGCGTTA CATTTCCTAA AAGCTTATCG CGCAAAGGGG TAAATAAAGT ACTCGTAAAA
CTTGATGTTG TTATCGATGA GCAGGGCAAG CTGACACTTG TGAATATAGT AGAAAACCCC
CACCCCGAAT TGGTGAGTGA AATACAACGG CTAGTTCGCA GCACACGCTT TACGCCACCC
CAAAAAGACA ACCAACCTGC ACGCGCACGT TTTATATGGC CCGTAGAGAT AGAAGCTTGA
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| Protein sequence | MNYKANIKRR VSWPSKLQLQ ASLLSLGILS AALFLLWLGQ WLQFTVEDKI EIREIAIATP
PPPPPPPPTL EQPVVETPIT LQVEGTGPSL ETIKLEPKFT LKKPDTPTIN TQQTQWQSLE
IDWDALSLND LDGLPSLLTQ LRVTFPKSLS RKGVNKVLVK LDVVIDEQGK LTLVNIVENP
HPELVSEIQR LVRSTRFTPP QKDNQPARAR FIWPVEIEA
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