Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_2803 |
Symbol | |
ID | 3968282 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 3538176 |
End bp | 3538682 |
Gene Length | 507 bp |
Protein Length | 168 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637921900 |
Product | phosphoribosylaminoimidazole carboxylase |
Protein accession | YP_528272 |
Protein GI | 90022445 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0041] Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase |
TIGRFAM ID | [TIGR01162] phosphoribosylaminoimidazole carboxylase, PurE protein |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 0.493531 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.00000161737 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGTAATA CGCCAAACAC TCCCATTGTG GGCGTGATAA TGGGCTCCAA GTCCGATTGG GAAACCATGC AGCACGCTAT CAATATATTG GAGCAGCTAG GTGTTCCATA CGAAACCGAG GTTGTATCGG CTCATCGCAC CCCAGATAAG CTCTTTCAAT ACGCTGAAGC CGCAGATGGT CGCGGTATTG AAGTGATCAT CGCCGGCGCA GGTGGCGCAG CACACTTACC TGGCATGGTT GCCGCGAAAA CCCATTTACC TGTATTGGGC GTGCCGGTGC AATCCAAAGC ATTAAACGGC ATGGATTCGT TGTTATCCAT TGCGCAAATG CCAGCTGGTA TTCCTGTAGG AACATTGGCT ATTGGTAAAG CTGGGGCGGC TAATTCCGCG TTATTGTCAG CGAGCATGCT TTCTAATAAG TACCCAGCTA TTAAAGAAGC GCTGTTAGCG TTTAGAAAAA ATCAAACAGA AACCGTTCTA GATAATCCAG ACCCGCGAGA GCAGTAA
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Protein sequence | MSNTPNTPIV GVIMGSKSDW ETMQHAINIL EQLGVPYETE VVSAHRTPDK LFQYAEAADG RGIEVIIAGA GGAAHLPGMV AAKTHLPVLG VPVQSKALNG MDSLLSIAQM PAGIPVGTLA IGKAGAANSA LLSASMLSNK YPAIKEALLA FRKNQTETVL DNPDPREQ
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