Gene Sde_2755 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_2755 
Symbol 
ID3968351 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp3487626 
End bp3488738 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content46% 
IMG OID637921855 
Producthypothetical protein 
Protein accessionYP_528227 
Protein GI90022400 
COG category[R] General function prediction only 
COG ID[COG4637] Predicted ATPase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0135345 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.421403 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAACAA TCAATCCAAT AAACAACTTG ACGATTCAGG GTTTTAAATC AATCAAAGAT 
TTAAAGCAGT TACGCCTTGA TAGCTTGAAT GTGCTTATCG GCGCCAATGG TGTCGGTAAA
AGTAACTTTG TTTCTTACTT TCGATTACTC GGTGAAATGC TGGATAAACG CCTACAAGTT
TGGACCAGTA AGCAAGGTGG TGCAGACAGG GTTGTTTCTT ATGGCGTTAA AGAGACGACT
AAGTTTTCGT CGTTTATTAA ATTTGGATTG AACGGCTATC AATTTGACCT TGAGACCACA
GCAGATGGTG GCTTCACGTT TGCTCGTGAA GCTCTTTTCT TTAAAGGGCC TTATTATGGT
GATAAATGGA TAGAGCTTGG AGCAGGTCAT GCTGAAGCAA AGCTTAAAGA TGCTTTTGAA
AAAGGGCATA AAGGCAGCGA AGCCGATTAC TGCTATAGCT CCATTTCTAG CTGGCGGGTT
TACCATTTTC ACGATACCAG CGACACCGCG GGTGTGAAAC GACTGGGCGC ACTTCACGAC
AATGCCTACC TTAGACCCGA TGCCTCTAAC CTTGCGGCGT TTTTGTATTC GCTGAAAGAA
AGCGAGAGCA AAGCCTATGA GCAGATTGTT AAAACAGTAC GCTTAGCTAT TCCGTTTTTT
GATGACTTTG TATTAAAGCC TCAAAAGCTG CCGACGGAAG AAGAGCAAAT CCGCCTGCTG
TGGAAGCAAA AAGACAGCGA CTATTCACTT TGGCCAAGCC AGTTGTCCGA TGGCTCGATT
CGATTTATCT GTTTGGTAAC CGCATTACTT CAACCAAAGC CGCCTTCGAC CATCATTATT
GATGAGCCAG AGCTGGGCCT GCATCCATTT GCCATTGCAT TGCTGGCAGG TTTATTACGA
TCAGCTTCTA AGCGCATGCA AGTGATTGTA TCTACCCAAT CCGCACCGCT GGTGGATGAG
TTTTCTATCG ACGATTTGAT CGTGGTGGAA CGCGAGCAAG GCGCGACGGT GTTTAAACGG
CTCAACGAGG AAGACTTCAC CAACTGGCTG GATGACTACA CTGTGAGTGA GCTTTGGCAG
AAGAACATTT TGGGTGGGAG ACCATCCCGA TGA
 
Protein sequence
MGTINPINNL TIQGFKSIKD LKQLRLDSLN VLIGANGVGK SNFVSYFRLL GEMLDKRLQV 
WTSKQGGADR VVSYGVKETT KFSSFIKFGL NGYQFDLETT ADGGFTFARE ALFFKGPYYG
DKWIELGAGH AEAKLKDAFE KGHKGSEADY CYSSISSWRV YHFHDTSDTA GVKRLGALHD
NAYLRPDASN LAAFLYSLKE SESKAYEQIV KTVRLAIPFF DDFVLKPQKL PTEEEQIRLL
WKQKDSDYSL WPSQLSDGSI RFICLVTALL QPKPPSTIII DEPELGLHPF AIALLAGLLR
SASKRMQVIV STQSAPLVDE FSIDDLIVVE REQGATVFKR LNEEDFTNWL DDYTVSELWQ
KNILGGRPSR