Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_2755 |
Symbol | |
ID | 3968351 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 3487626 |
End bp | 3488738 |
Gene Length | 1113 bp |
Protein Length | 370 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637921855 |
Product | hypothetical protein |
Protein accession | YP_528227 |
Protein GI | 90022400 |
COG category | [R] General function prediction only |
COG ID | [COG4637] Predicted ATPase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0135345 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.421403 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGAACAA TCAATCCAAT AAACAACTTG ACGATTCAGG GTTTTAAATC AATCAAAGAT TTAAAGCAGT TACGCCTTGA TAGCTTGAAT GTGCTTATCG GCGCCAATGG TGTCGGTAAA AGTAACTTTG TTTCTTACTT TCGATTACTC GGTGAAATGC TGGATAAACG CCTACAAGTT TGGACCAGTA AGCAAGGTGG TGCAGACAGG GTTGTTTCTT ATGGCGTTAA AGAGACGACT AAGTTTTCGT CGTTTATTAA ATTTGGATTG AACGGCTATC AATTTGACCT TGAGACCACA GCAGATGGTG GCTTCACGTT TGCTCGTGAA GCTCTTTTCT TTAAAGGGCC TTATTATGGT GATAAATGGA TAGAGCTTGG AGCAGGTCAT GCTGAAGCAA AGCTTAAAGA TGCTTTTGAA AAAGGGCATA AAGGCAGCGA AGCCGATTAC TGCTATAGCT CCATTTCTAG CTGGCGGGTT TACCATTTTC ACGATACCAG CGACACCGCG GGTGTGAAAC GACTGGGCGC ACTTCACGAC AATGCCTACC TTAGACCCGA TGCCTCTAAC CTTGCGGCGT TTTTGTATTC GCTGAAAGAA AGCGAGAGCA AAGCCTATGA GCAGATTGTT AAAACAGTAC GCTTAGCTAT TCCGTTTTTT GATGACTTTG TATTAAAGCC TCAAAAGCTG CCGACGGAAG AAGAGCAAAT CCGCCTGCTG TGGAAGCAAA AAGACAGCGA CTATTCACTT TGGCCAAGCC AGTTGTCCGA TGGCTCGATT CGATTTATCT GTTTGGTAAC CGCATTACTT CAACCAAAGC CGCCTTCGAC CATCATTATT GATGAGCCAG AGCTGGGCCT GCATCCATTT GCCATTGCAT TGCTGGCAGG TTTATTACGA TCAGCTTCTA AGCGCATGCA AGTGATTGTA TCTACCCAAT CCGCACCGCT GGTGGATGAG TTTTCTATCG ACGATTTGAT CGTGGTGGAA CGCGAGCAAG GCGCGACGGT GTTTAAACGG CTCAACGAGG AAGACTTCAC CAACTGGCTG GATGACTACA CTGTGAGTGA GCTTTGGCAG AAGAACATTT TGGGTGGGAG ACCATCCCGA TGA
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Protein sequence | MGTINPINNL TIQGFKSIKD LKQLRLDSLN VLIGANGVGK SNFVSYFRLL GEMLDKRLQV WTSKQGGADR VVSYGVKETT KFSSFIKFGL NGYQFDLETT ADGGFTFARE ALFFKGPYYG DKWIELGAGH AEAKLKDAFE KGHKGSEADY CYSSISSWRV YHFHDTSDTA GVKRLGALHD NAYLRPDASN LAAFLYSLKE SESKAYEQIV KTVRLAIPFF DDFVLKPQKL PTEEEQIRLL WKQKDSDYSL WPSQLSDGSI RFICLVTALL QPKPPSTIII DEPELGLHPF AIALLAGLLR SASKRMQVIV STQSAPLVDE FSIDDLIVVE REQGATVFKR LNEEDFTNWL DDYTVSELWQ KNILGGRPSR
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