| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2735 |
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| Symbol | |
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| ID | 3968368 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 3464973 |
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| End bp | 3466646 |
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| Gene Length | 1674 bp |
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| Protein Length | 557 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637921835 |
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| Product | alkylhydroperoxidase AhpD core |
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| Protein accession | YP_528207 |
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| Protein GI | 90022380 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0497] ATPase involved in DNA repair |
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| TIGRFAM ID | [TIGR00634] DNA repair protein RecN |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0271976 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTACCC ACCTGCATAT CAGTGACTTC ACCCTTGTTG ATACGCTCGA TCTTGAACTG
CAACCAGGCC TTACCACCGT TACCGGCGAG ACCGGCGCGG GTAAATCTAT CACCCTAGAC
GCCCTTGCCT TGGCCCTTGG CGACCGAGCC GACGCAGATA AAGTGCGCCC CGGCGCTAAA
AAAGCCGATA TACACGCAAG CTTTTGCTTA AAGGCCCTAC CCTTTGCTCG CAAGCAACTC
GAAGAGCAAG ACCTAGACCA AGGCGACGAA TGTATATTGC GACGTGTCGT TACCTCCGAA
GGCAGGTCAC GCGCCTACAT AAATGGCCAC ACGGTTACTC TGCAGCAGCT GCGCAGCTTT
GGCGAAAGCC TTATTGATAT TCACAGCCAG CACGAACACC AATCGCTGCT AAAAACCAGC
ACCCACCGCC GCTTATTGGA CGATTTTGGT GGCAATGAAA ATTTGGTTAA GCAAATAAAA
GCCGCTTTTA ACCAATGGCA CACAGCCAAT CAAACCCTTG AACAGGTGCG CAACAACAGC
GAAGAAATTA ACGCGCGCTT TCAATTACTG CGCTACCAAG TAGAAGAGCT AGACCAATTA
GATTTACAAG AGGGCGAGCT TGAGGCACTC GAAGAAGAAC AGAAAACGCT CGCTAACTCA
GAAGAAATTC AACAGGGCTG CCAACAAGTT AGCGCACTGT GCAGTGACGA TGAACAAGGC
TTAAACGCGG CCTTACACCA AGCTATACAC ATACTAAGTA AACTGCCGGG CAAGTCTAAG
CATTTAGAAG AAGCCGAAAG CTTGTTTCGC AGTGCAAGCA TCCACGTAGA GGAAGCCCAA
CGCGAAATAG ACCACCACAC CGACAGCATA GAAGACGATG CATCGCGCCT GCCTGAAGTA
GAAGCGCGCT TGACGGTAAT ATACGACATA GCCCGCAAAC ACCGCATACA GCCAGAAGAA
CTTATTGCAC TACACCAGTC ACTAGCTGAC GAACTTGCCA GCCTGCGCAG CGGTGACGAC
CAATTAGAAG CGCTTGAGCA AGAAGCCGCC CAAACCAAGG CAGAATTCGA TACCTACGCA
GCTAAGCTCA GCGAAAAGCG CGCGCAAGCA GCAAAGAAAC TAAGCACCCA AGTAAACAAA
AAACTTAAGC AGCTAGCAAT GGAAAACGCC CTCTTCGATA TCTCGCTGCC TGCGGCCACC
ACCAAACCTA ATCGCCACGG CAACGAAGAG GTAGAGTTTC TTATTTCTAC ACACCCAGGC
CAAGCACCCA AAGCACTCAG CAAAATTGCA TCCGGCGGTG AGCTTTCACG CATAAGCTTA
GCCATACAAG TTGTTACCGC ACAAACCTCC ACCACCCCCA CTATGGTATT CGATGAGGTG
GATGTGGGTA TTGGCGGCCC CACGGGCGAC ATAGTTGGCC AGTTGTTGCG AGAATTAGGC
GAAAAAGGCC AAGTTATTTG CGTTACTCAC CTTGCCCAAG TGGCGAGTAA GGCCCACCAA
CACTTATATG TGAGCAAATC GGTAAGCAAA AAAGACGTGA AATCTGACGT TAGCTACTTA
AGCCAAGAGC AAAAAATTGC CGAGCTTGCA CGCATGATGG GTGGCGACAC TGCGTCTGCA
CAATCGCTTG CACACGCTAA AGAGATGTTA GAACAAGCCG TGCCAGCTAG CTAA
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| Protein sequence | MLTHLHISDF TLVDTLDLEL QPGLTTVTGE TGAGKSITLD ALALALGDRA DADKVRPGAK
KADIHASFCL KALPFARKQL EEQDLDQGDE CILRRVVTSE GRSRAYINGH TVTLQQLRSF
GESLIDIHSQ HEHQSLLKTS THRRLLDDFG GNENLVKQIK AAFNQWHTAN QTLEQVRNNS
EEINARFQLL RYQVEELDQL DLQEGELEAL EEEQKTLANS EEIQQGCQQV SALCSDDEQG
LNAALHQAIH ILSKLPGKSK HLEEAESLFR SASIHVEEAQ REIDHHTDSI EDDASRLPEV
EARLTVIYDI ARKHRIQPEE LIALHQSLAD ELASLRSGDD QLEALEQEAA QTKAEFDTYA
AKLSEKRAQA AKKLSTQVNK KLKQLAMENA LFDISLPAAT TKPNRHGNEE VEFLISTHPG
QAPKALSKIA SGGELSRISL AIQVVTAQTS TTPTMVFDEV DVGIGGPTGD IVGQLLRELG
EKGQVICVTH LAQVASKAHQ HLYVSKSVSK KDVKSDVSYL SQEQKIAELA RMMGGDTASA
QSLAHAKEML EQAVPAS
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