Gene Sde_2699 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_2699 
Symbol 
ID3968441 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp3425694 
End bp3426098 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content46% 
IMG OID637921797 
Productheat shock protein DnaJ 
Protein accessionYP_528171 
Protein GI90022344 
COG category[S] Function unknown 
COG ID[COG3536] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00021338 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
GTGACTACAG TAACCCCAAG TAAAATAAAG CTTCACCGCA AATCCTGCGT GTTAGAGGTT 
GAGTTCGGCG AACAAAGCTA TCACTTAAAA GCCGAATATC TGCGTGTATA TTCGCCTTCA
GCCGAAGTAA AAGGCCACGG CCCAGGTGAA GAAGTGCTGC AATTAAACAA GGAGAATGTC
GCCATTACCG GCATAGAGCC CCTAGGTAAC TACGCTATTA AGCTTATTTA CAGTGATGGC
CACGATTCCG GCATATATTC TTGGGGCTAT TTAAAAGAGC TTGGTGAAAA TTACGAAGCA
AACTGGGCCG ACTACCTAGA ACGGGTAGAA AAGCACAAGA CTGAGCAAGC AGAAGCAGAA
GCCACAAAAG ATGTGAGCGC AGTAAAGTGG GTTAACCCCA ACTAG
 
Protein sequence
MTTVTPSKIK LHRKSCVLEV EFGEQSYHLK AEYLRVYSPS AEVKGHGPGE EVLQLNKENV 
AITGIEPLGN YAIKLIYSDG HDSGIYSWGY LKELGENYEA NWADYLERVE KHKTEQAEAE
ATKDVSAVKW VNPN