Gene Sde_2696 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_2696 
Symbol 
ID3968476 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp3423025 
End bp3423585 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content48% 
IMG OID637921794 
Productcarbamoyl-phosphate synthase, small subunit 
Protein accessionYP_528168 
Protein GI90022341 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG3087] Cell division protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.000193267 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000274083 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGGCCCGAG ATTACGCCAA GAAAAAGCCC CCTCAAGCAA GTAAACGCAA AGCAGAACCG 
CGGGTACCAG CGTGGGTTTG GTTGTTTACG GGAGCCGTGC TAGGTGCATT TATTATGTTT
TTGATGCGAC TTGCGGACAT GTCTCCGCAA GAAACGGCCA AAGAAGTAAA AGAAAAAACA
GCCGCTAACT CGGCCAAGAA CGAGGAGCAA AAGCCTCGTT TCGACTTTTA TGAGCTGTTA
AAAGACGCAA AAGTGCCCAC CCCAAAACCC GATACTAGCG GCCCCTCTGG TGCAGCCACC
GAACCGGAAG CACCGGCGAC TGAATATATT TTGCAAGTGG CATCATTCAA AAATAAAACA
GATGCCGAAG CGCTGCGAGC GCAATTAATT TTGCTAAATT TGGAAGCCAC AGTGCAGGAC
GCCAAAGTTA GAAACGGTGA AACTTGGTAC AGAGTGTTAG CGGGCCCTTA CCAATCACGC
TCAAGAATGT CTAAAGCGCG CAGCACGCTT ATATCTAACC GCTTCGAAGC CCTTGTGCTA
AAACGCAATA TCGAGAATTA A
 
Protein sequence
MARDYAKKKP PQASKRKAEP RVPAWVWLFT GAVLGAFIMF LMRLADMSPQ ETAKEVKEKT 
AANSAKNEEQ KPRFDFYELL KDAKVPTPKP DTSGPSGAAT EPEAPATEYI LQVASFKNKT
DAEALRAQLI LLNLEATVQD AKVRNGETWY RVLAGPYQSR SRMSKARSTL ISNRFEALVL
KRNIEN