| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2688 |
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| Symbol | |
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| ID | 3968468 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 3413377 |
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| End bp | 3413871 |
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| Gene Length | 495 bp |
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| Protein Length | 164 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637921786 |
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| Product | type 4 fimbrial biogenesis protein PilP |
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| Protein accession | YP_528160 |
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| Protein GI | 90022333 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3168] Tfp pilus assembly protein PilP |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0000848303 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0164816 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGTGCTCA TTTATGGGTG TGGTGGTGCA AGCGACCACT CCGAGCTTAA AAATTATGTT
AAATCTGTAA AGGCAAAGCC TGCTAGGGCT ATTGAGCCAT TGCCACCATT TCGGCCATAC
GAATCATTTG TATATTCAGC CGCTGCTGAG CGAAGCCCGT TTGATCGCCC TGTAGATGTT
ACTCAGCGCG TGTATGGTCG GACAGGAAGT GACGTTAAAC CAGATATGAA CAGGGAGAAG
GAATATCTGG AGTCATATGA GTTGGGTCAG CTTACTATGG TTGGCACGAT AACTAAAAGT
GGAAAACTTT GGGCGTTAAT CGCGGATCCA ACGGGGTTTG TGACTCGGGT GGCCGAAGGT
AATTTCATAG GGAAAAATCA CGGTCGGATA ACATCTACTG CGCAGACGCA GATTGAGTTG
CTCGAAATTG TTTCTGATGG TCTTGAGGGC TGGATAGAAA GGCCTCGCAT TCTCGCATTA
TCTGAGAAGG ATTAA
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| Protein sequence | MVLIYGCGGA SDHSELKNYV KSVKAKPARA IEPLPPFRPY ESFVYSAAAE RSPFDRPVDV
TQRVYGRTGS DVKPDMNREK EYLESYELGQ LTMVGTITKS GKLWALIADP TGFVTRVAEG
NFIGKNHGRI TSTAQTQIEL LEIVSDGLEG WIERPRILAL SEKD
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