| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2682 |
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| Symbol | gltD |
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| ID | 3968462 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 3401633 |
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| End bp | 3403084 |
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| Gene Length | 1452 bp |
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| Protein Length | 483 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637921780 |
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| Product | glutamate synthase subunit beta |
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| Protein accession | YP_528154 |
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| Protein GI | 90022327 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases |
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| TIGRFAM ID | [TIGR01318] glutamate synthase small subunit family protein, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.287891 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCGCCCC TAAAGGTAGT TGAGGCTGAA ACTATGGCTG ACCGTTTAAA AAACGATTTT
CAATTTATAG AAGTGGGTAG GCAAGATCCT ACTAAAAAGG ATATATCCAC TCGTAAACAT
GAATTCGTAG AAATTTATCA GCCCTTTTCG CAAGAGCAGG TGGCAGATCA ATCACACCGC
TGTTTAGAGT GTGGTAACCC CTATTGCGAA TGGAAGTGCC CCGTGCACAA CTATATTCCT
AACTGGTTAA AACTGGTTTC TGAAGGGAAT ATCGTTGAAG CCGCTGAGCT ATGCCATCAA
ACCAACTCTT TGCCTGAAGT GTGTGGTCGC GTGTGCCCGC AAGATCGTTT GTGCGAAGGT
GCTTGTACAC TTAACGATGG TTTTGGTGCG GTAACGATTG GCAACGCAGA AAAGTATATT
ACAGACACTG CCTTTGCGAT GGGCTGGCGC CCGGATATGT CCAAAGTAAC CTGGACCAAA
AAACGCGTGG CAATTATTGG CGCAGGCCCA GCTGGGTTAG GTTGTGCAGA TATCTTAGTT
CGCAACGGTG TTAAACCTGT TGTATTCGAT CGCAACCCAG AAATTGGTGG TTTGTTAACC
TTTGGTATCC CAGAGTTCAA ACTCGAAAAA ACAGTAATGT CTCGTCGTCG CGAAATTTTC
ACCGACATGG GTGTAGAGTT CCGCTTGAAT ACCGAAGTAG GTAAAGATAT TCAGATGGAA
GAAATTCTTG AAGAATACGA CGCTGTATTT ATGGGTATGG GAACCTACAC CTACATGAAA
GGTGGTTTCC CTGGCGAAGA TTTATCTGGT GTATACGACG CACTGCCGTT TTTAGTATCT
AACGTGAATC GCAACTTAGG TTTTGAAAAA GACCCTGCAG ACTTCATTAG CGTTAAAGAT
AAAAAAGTTG TGGTACTTGG TGGTGGTGAT ACCGCTATGG ACTGCAACCG TACCTCTATT
CGTCAGGGTG CTGAAAAAGT TACTTGTGCA TACCGACGCG ATGAAGCCAA CATGCCAGGT
TCTGTACGCG AAGTGCAAAA TGCGCGCGAA GAGGGTGTTG AGTTCTTATT CAACCGTCAA
CCAATCGCTA TTGTTGGCGA AGGCCGCGTT GAAGGCGTTA AAGTTGTGAC TACTCAAATG
GGTGAGCCTG ATGAGAATGG TCGCCGTCGC CCAGAGCCAA TACCTGGTAG TGAAGAAATT
ATTCCTGCCG ACGTAGTGCT TATTGCTTTT GGTTTCCGTC CAAGCCCAGA GCCTTGGTTC
GAAACACATG GTATTAACTT AAACAACTGG GGCGGTGTTG TAGCGCCTGC AGAGCAAAAG
TTTAAATACC AAACCACTAA CGATAAAGTT TTTGCTGGTG GTGATATGGT GCGTGGTTCC
GACTTGGTTG TTACTGCAAT CTGGGAAGGC CGCGAAGCCG CGGAAGGTAT TCTAGATTAT
TTAGACATTT AA
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| Protein sequence | MSPLKVVEAE TMADRLKNDF QFIEVGRQDP TKKDISTRKH EFVEIYQPFS QEQVADQSHR
CLECGNPYCE WKCPVHNYIP NWLKLVSEGN IVEAAELCHQ TNSLPEVCGR VCPQDRLCEG
ACTLNDGFGA VTIGNAEKYI TDTAFAMGWR PDMSKVTWTK KRVAIIGAGP AGLGCADILV
RNGVKPVVFD RNPEIGGLLT FGIPEFKLEK TVMSRRREIF TDMGVEFRLN TEVGKDIQME
EILEEYDAVF MGMGTYTYMK GGFPGEDLSG VYDALPFLVS NVNRNLGFEK DPADFISVKD
KKVVVLGGGD TAMDCNRTSI RQGAEKVTCA YRRDEANMPG SVREVQNARE EGVEFLFNRQ
PIAIVGEGRV EGVKVVTTQM GEPDENGRRR PEPIPGSEEI IPADVVLIAF GFRPSPEPWF
ETHGINLNNW GGVVAPAEQK FKYQTTNDKV FAGGDMVRGS DLVVTAIWEG REAAEGILDY
LDI
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