Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_2662 |
Symbol | |
ID | 3968481 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 3378060 |
End bp | 3379244 |
Gene Length | 1185 bp |
Protein Length | 394 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 637921760 |
Product | ATP phosphoribosyltransferase regulatory subunit, putative |
Protein accession | YP_528134 |
Protein GI | 90022307 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3705] ATP phosphoribosyltransferase involved in histidine biosynthesis |
TIGRFAM ID | [TIGR00443] ATP phosphoribosyltransferase, regulatory subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAAG TAGATCGTTG GCTATTGCCA GACGGTATAG AAGAAGTTCT CCCCGAGGAA GCAAGCCGAG TAGAAGGTTT GCGTCGACGC TTAGTAGACC TTTTTCAGTC CTGGGGGTAC GACTATGTTA TCCCACCTAT GGTTGAATTT ATCGATTCCC TTCTCACCGG TTCAGGTGAA GATGCCTACC TAGATACCTT TAAAATAACC GATCAGCTCT CTGGCAAAAC CATGGGTATA CGTGCGGATA TAACCCCTCA AGCAGCCCGA ATGGATGCCC ACAGCTTGCA GCGCGAAGGC TTAAATCGCC TTTGCTACGC GGGCCATGTG ATGTACACCA AGCCCAAGGG GCCTTTGGCG TCGCGCACGC CTATTCAAGT TGGTGTAGAG CTGTTTGGTG AAAGTGGCCT AGACGCCGAT ATAGAGGTCA TCTCTTTATT GTTAGAAACG CTAGAGGCCG CAGGCCTGCC AGACTTATAC ATAGATATTG GTCACGTTGG CGTATACCGT GCGCTAATCG AAGAAGCCGG TATTAGCAAA GAGCAAGAAG AAGTGTACTT CGAGCTGCTG CAAGCCAAAT CTATAAATAG CATTGAGTCT TGGGTTGCCA ATAACATAAC CGATGCAAAA ATGGCTGAAT GGTTATTGGC GTTACCTCGC CTAGCGGGTG GCAATCATAT TCTCGCTGAA GCTAAAGCCC TATTTGAAGA TGCGCCGGCA GAAGTGTCTG CGGCTATCGA CGAGCTCGAA ATGATCGACT CTGTGTTAAC CGAGCGCTAC CCGCATTCCA AGCGTTATTT CGACTTGAGC GAATTGCGCG GGTATCACTA TTACACCGGT GTAATTTTTG GCGCATTTGC CCCAGGCCTT GGCAACGCAA TCGCCAATGG CGGCAGGTAC GATCATGTTG GTGAAGCCTT TGGGCGCGCG CGCGCGGCAA CAGGCTTTGC AGCCGATCTT ATGTCTATTA GCCGTGTAAC CGGCCGCTGT GAGTTAGCCC CTTCTGGTAT TTATGTAGAG GATAGCGACG CAGACGGTAT CTGGGCGAAG ATTAAGCAGC TGCGCGCAAG TGGTGAGCGC GTAGTGTGTG CCCTAGCAGG GCAAACAGCA CCATACAAAC ACCAGCACTG TAATCGTAAA TTGATTAAGC AGGGCGAAGA ATTCGTAGTA GCGCCGATTA AGTAA
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Protein sequence | MKKVDRWLLP DGIEEVLPEE ASRVEGLRRR LVDLFQSWGY DYVIPPMVEF IDSLLTGSGE DAYLDTFKIT DQLSGKTMGI RADITPQAAR MDAHSLQREG LNRLCYAGHV MYTKPKGPLA SRTPIQVGVE LFGESGLDAD IEVISLLLET LEAAGLPDLY IDIGHVGVYR ALIEEAGISK EQEEVYFELL QAKSINSIES WVANNITDAK MAEWLLALPR LAGGNHILAE AKALFEDAPA EVSAAIDELE MIDSVLTERY PHSKRYFDLS ELRGYHYYTG VIFGAFAPGL GNAIANGGRY DHVGEAFGRA RAATGFAADL MSISRVTGRC ELAPSGIYVE DSDADGIWAK IKQLRASGER VVCALAGQTA PYKHQHCNRK LIKQGEEFVV APIK
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