| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2648 |
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| Symbol | |
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| ID | 3968506 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 3349193 |
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| End bp | 3350344 |
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| Gene Length | 1152 bp |
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| Protein Length | 383 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637921746 |
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| Product | uroporphyrinogen decarboxylase HemE |
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| Protein accession | YP_528120 |
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| Protein GI | 90022293 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
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| COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000000000278082 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0916898 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGTAAAT GCCTGATGGA AAGTATAGTG GAATTAGAGT TGCCTCAAGG TAACCCAATT
AAAATAAAAT CCGTAGCAGT CGAGCATTAC AAGGTTCCGC TAGCTGAAGT GTTGTCTGAT
GCAAAGCACG GGGATCATAC CTATTTTGAG CTAATAGTTA GCCGTATCAC TTGCCAAAAT
GGTGTAGAAG GTGTGGGTTA TACCTATACC GGTGGGTCCG GCGGTTCGGC AATCTATTCG
CTATTAGTCG ATGAAATTAA GCCTATGCTT GTTGGGCGGG ACGCCACCCA AATTCTAGCC
ATATGGGAAG AAATTTATTG GCGCTTACAT TATGTTGGGC GCGGTGGTTT AGTTAGCTTT
GCTCAGTCAG CGGTTGATAT TGCATTGTGG GATATTCGCT GCAAGTTGTT GGGGCAACCC
CTGTGGAAAG TGGCGGGCGG TTTAAGCAAT AAAACACGCT GCTATGCCGG CGGTATAGAT
TTAAATTTTT CGCAAGAAAA ACTATTAAGC AATATACAAG GTTATTTAGA CGCGGGCTTT
AATGCTGTAA AAATTAAAGT TGGCAAAGAT AATATTAAAG AAGATATTGC GCGTGTACGC
GCAGTGCGAG AGTTAATTGG CAAAGATACC ACATTTATGG TGGATGCCAA CTACTCCATG
ACCAAAGAAA AAGCCATTCG TTTTGCTAAC GCCATAGAAG ACCAAAATAT TACTTGGTTT
GAAGAGCCAA CATTGCCAGA CGATTACCAA GGCTATGCCG ATATCGCTCA AGCAATATCA
ATACCCCTAG CTATGGGTGA AAACCTACAC ACTATTCACG AATTTACCTA TGCCGTGCAA
CAAGCCAAGC TTGGTTTTTT GCAGCCCGAT GCTTCTAATA TTGGTGGTAT TACTGGTTGG
TTGAACGTTG CAAGTTTAGC AAACGCACAC AACTTACCGG TGTGCAGTCA CGGCATGCAA
GAGTTGCACG TTTCACTTAT GTCGTCTCAG CCCAATGCGG GTTATTTAGA AGTTCACTCC
TTTCCTATCG ACCAATACAC AACACAACCG CTAGCAATGG AAAACGGTTA CGCACTAGCA
CCAGATATAG AAGGCACGGG TGTTGTGTTT GTCGATGAAT TATTACGTGG CCATTTGGCT
AAAAAATCCT AA
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| Protein sequence | MSKCLMESIV ELELPQGNPI KIKSVAVEHY KVPLAEVLSD AKHGDHTYFE LIVSRITCQN
GVEGVGYTYT GGSGGSAIYS LLVDEIKPML VGRDATQILA IWEEIYWRLH YVGRGGLVSF
AQSAVDIALW DIRCKLLGQP LWKVAGGLSN KTRCYAGGID LNFSQEKLLS NIQGYLDAGF
NAVKIKVGKD NIKEDIARVR AVRELIGKDT TFMVDANYSM TKEKAIRFAN AIEDQNITWF
EEPTLPDDYQ GYADIAQAIS IPLAMGENLH TIHEFTYAVQ QAKLGFLQPD ASNIGGITGW
LNVASLANAH NLPVCSHGMQ ELHVSLMSSQ PNAGYLEVHS FPIDQYTTQP LAMENGYALA
PDIEGTGVVF VDELLRGHLA KKS
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