Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_2631 |
Symbol | |
ID | 3968528 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 3327031 |
End bp | 3329379 |
Gene Length | 2349 bp |
Protein Length | 782 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637921729 |
Product | hypothetical protein |
Protein accession | YP_528103 |
Protein GI | 90022276 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.979732 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCATTT CCAGCAGAAT GACTCTTCAC ACGCTCGCAG CAGTGGTATT CACTGTTGCG TTGCTTAGTG CCTACTTCGC GCGGGAGATG AAGCAGGCAC TGGTCGACGG TGAAGTGCGC AACCAGCAAG CACAGCTCGA TTTACGTGTA CAACACTTTA ATAGCGGCAT AGAGCAGTTG CGGTCTGATG CGCTGCTTAT TAGTGAATCC CCATTTATTG TCGAATGGTT TAAGCAAAGC ATTAATGTTA TCGATGATGC TAACGACCAA ATTAGTACCA ATACCTCTCT GCCCTCAAAT GCCTACAGTT CACTTATAGA GCAATCATTT AATAATCTGC TCACTCGCCG GCCCGATTAC TTTCAGGCCC GCATTCTTTC CATTTCTGGT GACGAGTTGA TTCGTGTAGA GCGCCAGAAC GGTGCTGTTA AGGTGGTAGC GGCCAAGCAA TTACAAGATA AATCGGAAAC AGAGTATTTT GAGGCGGCCA AAACTCTTAG CGCTGGCGAA GTGTATTTAA GCGACATAAA CCTTAATGAG GAGTACGGCG CCATTGCGCA ACCAGAAGTA ACCACGTTGC GCGCTGCTGC GCCTATATTT GATGGTAATG GCAAGCTGTT GGGTGTGTTT GTAATCAATA AAAATGTGGG CAGCTTCGTT CGTGCAACGG TAACTAATAG CAGTGTAGGT GATGTATTCG TATTAAATGC ACGCGGCCAT TTTATTTATC ACCCTCAAAA TGAGTACACC TTTTCTGAGC AGCGCGGCAC CGATTACACA TTTGCCAAGC AGTGGCCTGA AATAGCAAAG TCGTTGTTAG TAGCATTTGA AAAGGATGCA TTTAACTTAG CGACGAGTAG CTTAAATCTA GATAACTATG TAGTAAATGC TAGAAAAGTA AGCTACCACA AAGGCACCAC ACCTAAGTAT ATTTCCATTA TTCAAATGGC GCCTTCTAGC CATTTTTCTG CGCAAACCAT ACAGGCGCTG CAGCGTCAGA TATTCGCTGT GGCCCTATTG TTAGCTGTGT GTATTGCATT AGCGTGGTTT TTTAATCGCA TAATGGTTAA ACGCGTTTAT ATGTTAGGCG AGCTTTCTAA TTGTGTTGCT GCAGGGGGGC GAGACTTAAA ACTACCTGAA GATCGCGGCG ATGAGGTCGA CCACGTAGCA AAAGCGTTTC AATCCATGGT GGATCAAATC GATGGTAGAG AAAAGCTTCT ACACTTAGAA AAAGTAAAAA TACAAGCAAT CTTCGATGCA GTAAACAGTG GGCTAATAAC CACAAATGAA GACGGCTATA TCGAAGAAGT AAACCAGTTT GGAGCCCACT TGCTAACAAG CGAGCCTCAA GCAATGGAGG GGAAATTTAT AGGTGACTAC CTAAAAAGCG AAAGCAGTCT TAATTCTAAT GTGTTTCAGG CTTATTTCGC GTTGCAGCAG GAGGCAACGC AGCCATTTCA TTTTGAGGTA ATCGGTCTTC GTCATACTGG CCCGTTTCCT GTACAGCTAA GTGTTGCTAG GTTCACTCTC GATGGCAAAA CTTTTTATGT GGCCGCAATA GAAGATATTA GTGAGCGAAA AAGCATACAG TTAAGTCTAG ATAAGTACGC TAAAAAGTTG GAAGCGAGCA ACAAAGAATT ACAAAGTTTT GCCTATGTGG CCTCGCACGA TTTGCAAGAG CCGGTTAGAA AAATACAGTC GTTTGGCGAG CTGTTAGAGC GCGAAGAAAA AGCAAACCTT TCCGAAAATG GTCAACTGTA TCTTAGCCGT ATGGTGTCTG CAGCGGAAAG AATGCGCAGC TTAATCAGCT CGTTATTGGA GCTTTCTCGC GTCGGTAAAG AGCAAAATCA ATGCGAATGG GTAGATGTAG AGTTGCAGTG TCGCGAGATA ACCGACGACC TAGAAAAGCT AATTACGGAG AAAAACGCCG AGGTTAGCAT CGGCCCCTTA CCGCATGTAT GGGGCGAGCC AGTGCAAATG CGCAGACTTA TGCAAAACTT AATAGGTAAT GCGCTTAAGT ATGTAAAAGT AAATGTTCGC CCCGTGGTGG AGGTGGGGAT GTATTGCCCA ATGGATGTGG GTAATGAGTT CGCTTTAGAG TTGGAGCGGT ACCCAGTGGC TTTTTTTGTG CAAGACAACG GAATAGGAAT AGCGCCTGAA TTTCGCGAAA AAATATTTGT GGCGTTTGAA CGGCTACATG GGCGTAGTCA ATACCAAGGC AACGGAATTG GGCTGGCAAT TTGCAAGAAA ATTGTAGAGG GCATGGGTGG AATTATATTT GTCGATGACA ACCCAGCGGG TGGTTCCCGC TTTGTAGTAG CTTTGCCCAA GGCCGGGCCT GAAAGCTAG
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Protein sequence | MRISSRMTLH TLAAVVFTVA LLSAYFAREM KQALVDGEVR NQQAQLDLRV QHFNSGIEQL RSDALLISES PFIVEWFKQS INVIDDANDQ ISTNTSLPSN AYSSLIEQSF NNLLTRRPDY FQARILSISG DELIRVERQN GAVKVVAAKQ LQDKSETEYF EAAKTLSAGE VYLSDINLNE EYGAIAQPEV TTLRAAAPIF DGNGKLLGVF VINKNVGSFV RATVTNSSVG DVFVLNARGH FIYHPQNEYT FSEQRGTDYT FAKQWPEIAK SLLVAFEKDA FNLATSSLNL DNYVVNARKV SYHKGTTPKY ISIIQMAPSS HFSAQTIQAL QRQIFAVALL LAVCIALAWF FNRIMVKRVY MLGELSNCVA AGGRDLKLPE DRGDEVDHVA KAFQSMVDQI DGREKLLHLE KVKIQAIFDA VNSGLITTNE DGYIEEVNQF GAHLLTSEPQ AMEGKFIGDY LKSESSLNSN VFQAYFALQQ EATQPFHFEV IGLRHTGPFP VQLSVARFTL DGKTFYVAAI EDISERKSIQ LSLDKYAKKL EASNKELQSF AYVASHDLQE PVRKIQSFGE LLEREEKANL SENGQLYLSR MVSAAERMRS LISSLLELSR VGKEQNQCEW VDVELQCREI TDDLEKLITE KNAEVSIGPL PHVWGEPVQM RRLMQNLIGN ALKYVKVNVR PVVEVGMYCP MDVGNEFALE LERYPVAFFV QDNGIGIAPE FREKIFVAFE RLHGRSQYQG NGIGLAICKK IVEGMGGIIF VDDNPAGGSR FVVALPKAGP ES
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