| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2613 |
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| Symbol | |
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| ID | 3968606 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 3309603 |
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| End bp | 3311051 |
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| Gene Length | 1449 bp |
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| Protein Length | 482 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637921711 |
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| Product | OmpA family protein |
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| Protein accession | YP_528085 |
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| Protein GI | 90022258 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0226] ABC-type phosphate transport system, periplasmic component
[COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
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| TIGRFAM ID | [TIGR02136] phosphate binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.429058 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTATTAA AAACTTTCGT TTCTTTTTTA TTCGCCGCAT GTTTAACACT CACTGCAACC
GGCGCGTACT CACAGGACGA AGGAATGGAA GCCTTCTCAA ACCAAACAGC AGGAAAGCTC
TTTACCATAA AAGGCTCTAA CACCATTGGC GCCAAACTTG CGCCAGCTTG GGTAAAAAAT
TACCTAGAAG CAAAGGGCCT AACTAACGTT AGCATTAAAA CCACCAACAT AGAAAATGAA
TACCGCATAG AGGGCTATAA CGGCGACTTA CCCGTTTTTG TCGACATCCA AGCACATGGC
TCTGGCACCG GCTACAGCGG CTTAGCAGAC GGCACAGGCA ATATAGCTAT GTCTTCTCGC
CCAATTAAAG AAAGCGAAGC AACATTACTG CAATCACTTG GCAATATGCG CGACTTTGCT
GCCGAAAAGG TGGTGGCAAT TGATGGGCTT GCGGTAATTG TTAATCGCTT CAACCCTGTT
TCAAGCCTTA CAGTCGACCA AATTGCCAAA GTGTTTGCTG GTGAAATATC AAACTGGTCG
CAACTGGGCG GCGGTGATAT ACCCATTCGA GTTTACGCTA GGGATGATAA ATCGGGCACC
TGGGATACCT TTAAAAGCCT AGTGCTGGGT AAGAGCTACT CGCTTACTGC TTCAGCTGAA
CGCTTTGAAT CAAACGATCA ATTATCAGAC CGTGTAAGCA CTGCCCCAGG CGGCATTGGG
TTTGTAGGGC TAGCGTCTGT CCGCCGAGCA AAGGCACTGG GTATTTCAGA AGACTCTACC
GACCCGCTAA AGCCTGAGCC TTTATATGTT GCAACGGAAG ATTACCCGTT AGCGCGCCGT
TTATTTATGT ATGTGTCACC TAAGCAAAAT AACCCACTAC TAAATGAATT TATCCACTTT
GTACAAAGTA CTAAAGGGCA AGAAATCGTA AACCAAATTG GCTTTATTTC GCAAAACCCG
CTTAGCTTAC AGTCTGAGCT ATACGCAGAT GCGCCGCAAA CCTATAAAGT ACTTACCGAA
AATGCCATGC GCTTATCGGT TAACTTTCGC TTTAAAGATG GCAGCGCCGA ACTCGACAAT
AAAGCAAAGC AAGATATTCT GCGCATTGTT CGCTATATGC AAATGCCGGA GAACGCCGAT
AAACGCATTC AACTTGTAGG CTTTGGCGAT AGCAAAGAAA CTGCAGCTCG GTCTACTGTA
CTTTCCAAAT TGCGTGCAGT TGCGGTTAAG TCTGCCTTAT ACAGCTACGG CATTTCTAGC
GAATCGGTTT TAGGCTTAGG GTCAGATCTA CCCGTGGCTT CTAACGCGGG TAGCGCGCGA
TTAAAAAATC AACGTGTCGA AGTTTGGGTA TTTGATTCAC AGCTGCGCTC TATGATAACC
AAAACGAAAA AAGACGCCTC CCGAGAGAAG CGCCAAGCGG CTACAATTGA TTACGCAGGC
TCTCATTAG
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| Protein sequence | MLLKTFVSFL FAACLTLTAT GAYSQDEGME AFSNQTAGKL FTIKGSNTIG AKLAPAWVKN
YLEAKGLTNV SIKTTNIENE YRIEGYNGDL PVFVDIQAHG SGTGYSGLAD GTGNIAMSSR
PIKESEATLL QSLGNMRDFA AEKVVAIDGL AVIVNRFNPV SSLTVDQIAK VFAGEISNWS
QLGGGDIPIR VYARDDKSGT WDTFKSLVLG KSYSLTASAE RFESNDQLSD RVSTAPGGIG
FVGLASVRRA KALGISEDST DPLKPEPLYV ATEDYPLARR LFMYVSPKQN NPLLNEFIHF
VQSTKGQEIV NQIGFISQNP LSLQSELYAD APQTYKVLTE NAMRLSVNFR FKDGSAELDN
KAKQDILRIV RYMQMPENAD KRIQLVGFGD SKETAARSTV LSKLRAVAVK SALYSYGISS
ESVLGLGSDL PVASNAGSAR LKNQRVEVWV FDSQLRSMIT KTKKDASREK RQAATIDYAG
SH
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