| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2550 |
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| Symbol | |
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| ID | 3968716 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 3235491 |
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| End bp | 3236252 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637921648 |
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| Product | hypothetical protein |
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| Protein accession | YP_528022 |
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| Protein GI | 90022195 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1496] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00726] uncharacterized protein, YfiH family |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.00295437 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | GTGATTGAGC CTATTATTCC CCATTGGCCA GCGCCAGCAA ATGTAAGGTC GTTAATTACT
ACTCGGCAAG GAGGGGTAAG TAAAGCTCCC TATAATAGCT TTAACTTGGC TACCCATGTA
GATGATGCGC CACAAGCCGT AATGCAAAAT AGGCAAATTC TAACTCGTGA GCTGGGGTTA
GATGTGTGCT GGCCAACGCA AGTGCACGGT GTAGACATTT ATGAGTTACA ACTAAAAAGC
GATCTCGCTG CCAGCCCTCA AGCTGATGCC GTTGCAACCA AACAATACAA TACCGTTTGC
GCAGTGCAAA CCGCCGATTG TTTACCTCTA TTAATGTGCG ACAAAAAAGG CTCGCAGGTG
GCCGCAATTC ACGCAGGCTG GCGTGGGCTA GCTACGGGGA TAATTGAAAA AACTGCGCTT
GCGTTCGATA CTAACCCTAA CGAATTACTA GTGTATTTGG GCCCAGCTAT TTCGGCACAG
CATTTTGAGG TGGGGCCAGA GGTTGTAAAC AGTTTTCGCC AAGTGGCTGT CAAAAACAAT
TGGCCGACGA AATGGCAAAA TGCGATTAAG CCGCATACAA AAAATACCAG TAAAGCGTAT
TTGGACCTTT ACCTATTGGC TACTGCTGCA CTAAATAGCG TTGGGGTTGA TGCTATATAT
GGTGGCGATT ACTGCACCTA TGCAGATGAA CAACGTTTTT ATTCGTATAG ACGGGATGGG
CAGTGCGGCA GAATGGCCAG CCTAATATGG CTGGCCGCAT AG
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| Protein sequence | MIEPIIPHWP APANVRSLIT TRQGGVSKAP YNSFNLATHV DDAPQAVMQN RQILTRELGL
DVCWPTQVHG VDIYELQLKS DLAASPQADA VATKQYNTVC AVQTADCLPL LMCDKKGSQV
AAIHAGWRGL ATGIIEKTAL AFDTNPNELL VYLGPAISAQ HFEVGPEVVN SFRQVAVKNN
WPTKWQNAIK PHTKNTSKAY LDLYLLATAA LNSVGVDAIY GGDYCTYADE QRFYSYRRDG
QCGRMASLIW LAA
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