Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_2533 |
Symbol | ruvB |
ID | 3968728 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 3204865 |
End bp | 3205899 |
Gene Length | 1035 bp |
Protein Length | 344 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637921626 |
Product | Holliday junction DNA helicase RuvB |
Protein accession | YP_528005 |
Protein GI | 90022178 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2255] Holliday junction resolvasome, helicase subunit |
TIGRFAM ID | [TIGR00635] Holliday junction DNA helicase, RuvB subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.26511 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.321859 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTGAGC AAGACCGAAT TATTGATGCT AACGCCAAAA GCCGCGAAGA GCAGATAGAC CGAGCTGTAC GCCCGAAGAG CTTGAAAGAA TATATTGGTC AGCCGGTTGT GCGCGAGCAG ATGGAAATAT TTATCGGCGC CGCGCAAGCG CGCGGTGATA GTTTGGATCA TACGCTTGTA TTTGGGCCGC CTGGGCTGGG TAAAACAACG CTGGCGAATA TTATCGCCGC AGAAATGGGG GCGGATCTAA AGTCCACATC TGGGCCCGTA CTCGAGAAAG CTGGCGACCT AGCTGCTCTA ATGACAAACT TAGAGCCGGG CGACGTTTTA TTTATTGATG AAATACATCG ATTAAGTCCG GTGGTAGAAG AAATATTATA CCCCGCGATG GAAGACTTTC AGTTGGATAT CATGATTGGT GAGGGGCCAG CCGCGCGCTC TATTAAGCTT GAATTACCGC CGTTTACGCT TGTCGGGGCA ACTACGCGTG CAGGGTTGCT TACTTCCCCT TTGAGGGATC GATTCGGAAT TGTTCAGCGT TTAGAGTTTT ACAATATTGA AGATCTCACT CATATTGTTG AGCGTTCTGC GTCCTTGATG GGGGTTGCTA TGGATACTCC CGGTGCAAGG GAGGTTGCTA AACGGTCTCG TGGAACACCG CGCATTGCCA ATCGTTTACT GCGTCGCGTA CGAGATTATG CTGAAGTTAA ATCAGATGGT ACGGTAACAG CGCAAATTGC AGATCTTGCT CTTAATATGC TCAACGTTGA CGAGCACGGC TTTGATCATA TGGATCGCAG GCTATTGCTC ACGCTTATAG AAAAATTTGG TGGCGGACCG GTGGGTGTCG ATAGCCTGGC AGCAGCAATT AGTGAAGAGC GCGACACGAT AGAAGACGTG CTTGAGCCGT ATCTTATTCA GCAGGGGTTT ATTATGCGTA CTCCGCGTGG TCGAATGGCT ACTCAATTGG CATATCAACA TTTCGGTTTG AATGTGCCTG CAGCGCTAAA GCAAGATTCG CTTCCTGGCA TATAA
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Protein sequence | MIEQDRIIDA NAKSREEQID RAVRPKSLKE YIGQPVVREQ MEIFIGAAQA RGDSLDHTLV FGPPGLGKTT LANIIAAEMG ADLKSTSGPV LEKAGDLAAL MTNLEPGDVL FIDEIHRLSP VVEEILYPAM EDFQLDIMIG EGPAARSIKL ELPPFTLVGA TTRAGLLTSP LRDRFGIVQR LEFYNIEDLT HIVERSASLM GVAMDTPGAR EVAKRSRGTP RIANRLLRRV RDYAEVKSDG TVTAQIADLA LNMLNVDEHG FDHMDRRLLL TLIEKFGGGP VGVDSLAAAI SEERDTIEDV LEPYLIQQGF IMRTPRGRMA TQLAYQHFGL NVPAALKQDS LPGI
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