Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_2515 |
Symbol | |
ID | 3968797 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 3186523 |
End bp | 3187404 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637921606 |
Product | putative signal transduction protein |
Protein accession | YP_527987 |
Protein GI | 90022160 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1639] Predicted signal transduction protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 43 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTATGC TGACTATGAT TCCACAGCAA AAACTGTCTG ACGCCCTCCC ACCTGTTGCC CGCGAGTTAG GGGAACAGGT GAAGAAAGGA GAGGTGGTAG TACCGCTGCT TCCCAAAGTA GCCAACCGCG TTATCTCGCT AACACAAACA GAAGATTCAA ATGCAGCTGA ATTGGCATCG TTAATTCAAA GCGACCAAAC CCTTGCCGGC CACGTAATTC GAGTAGCCAA CTCGGCAGCA TACAGCCCCG TTAGCAGCAT TGTTTCACTG CAACAGGCTA TCACCCGCTT AGGTATGGCA ACCATTGCAG AAATCGCCCT CGCAGCCACC GTAAACGCAT CGTTATTCAA TGCCCCAGGT TTTGAAGCCT TAATTCAGCA GCGCCTCCGT CACTCACTGG CATCGGGGCT ATGGGCCAAA GAAGTAGCCC GAGCCTGTCG CAGAAACGTA GAAGCCGCCT TTTTAGGCGG GCTACTACAA GATATAGGGC GACCGGTAAC TATTCAGGCG GCCTCCGAAA TAGCCGCAAA GCTAGGGAGT TTTATTCCAC CAGAAGGCAT GGCCCTGCTA GAAAAAACAT TCTGTCGCAG AATGAGCATT ACCGTGGTTA ACAAATGGGA AATGCCAGAT TCTGTACAGC AAGTGGTTAA GTATTTTGAC GATTACCAGC CTCCGCACTC GGCAAAAAAT CAAACTGTGG TAGCCGTTGG CGGTGTAGTA ATTGCCAATT ATTTTCAGGA AAACCAAAGC GGGAGCGCCA ATCTTGATAC CTTGGTAGCG CACCCTATAT TCAGCGAGCT TAATTTATAT AGAGATGAAA TTGAGCAAGT GGTAGCCCGT GCAGACAAAG TAAATGCCAC CCTCGAGGCA ATGCAACTAT GA
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Protein sequence | MSMLTMIPQQ KLSDALPPVA RELGEQVKKG EVVVPLLPKV ANRVISLTQT EDSNAAELAS LIQSDQTLAG HVIRVANSAA YSPVSSIVSL QQAITRLGMA TIAEIALAAT VNASLFNAPG FEALIQQRLR HSLASGLWAK EVARACRRNV EAAFLGGLLQ DIGRPVTIQA ASEIAAKLGS FIPPEGMALL EKTFCRRMSI TVVNKWEMPD SVQQVVKYFD DYQPPHSAKN QTVVAVGGVV IANYFQENQS GSANLDTLVA HPIFSELNLY RDEIEQVVAR ADKVNATLEA MQL
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