Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_2514 |
Symbol | |
ID | 3968796 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 3184785 |
End bp | 3186257 |
Gene Length | 1473 bp |
Protein Length | 490 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637921605 |
Product | hypothetical protein |
Protein accession | YP_527986 |
Protein GI | 90022159 |
COG category | [S] Function unknown |
COG ID | [COG0397] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTAGAAC ATCTAAAATT CGATAACTCC TTCGATAAAC TAGGCTCAGA TTTCGCTACC CGCGTTAACC CAAGGCCATT GGTTAACCCT AAGCTTGTTT GTGTAGACTC AAAAACCTGC GAACTATTGG GTATAAGCAA AGACAGCGTC AGCAGCGAAA ACGGGGTTAA TATGTTTTCG GGCAATAGGG TTCCCCCACA ATTCGCTCCG CTGGCGATGG TTTATGCCGG CCATCAATTT GGTGGGTATT CCTCGCAACT TGGGGATGGT AGGGGCTTAT TACTTGGTGA ACTAAATACC CATTCAGGTA AGTATGACCT TCACCTAAAA GGAGCCGGCA AAACCCCGTA TTCTCGCTTT GGTGATGGCT ATGCCGTGCT GCGCTCGTGT ATTCGCGAAT ACCTCGCTGG TATCGCTATG CGTGGCCTAG GCATTCCAAC TAGCCATGCG TTATGTGTCG TACGCGGCGA CAACGCCGTT ACCCGCGAGA CTATCGAACC CGCAGCTACA CTTACCCGAG TAGCACGCAG CCATATTAGG TTTGGCTCGT TCGAGTACTT CTATTACACA CAACAGCATA CGCAATTAGA ACAACTAGCA GACTATGCTG TTGAGCAATA TATCCCCGAA TACGTTGATA AAGATGGCCG TTTTAACGCC CTGTTGCATT ACACCACCGA GCAAACAGCA AAATTGATAG CCGCGTGGCA AGCGGTGGGC TTTTGCCATG GCGTGATGAA CACCGACAAC ATGTCTATCA TTGGGGAAAC CTTAGATTAC GGCCCCTATG GCTTTATGGA AGCGTATAAC CCAACTCACA TCTGTAACCA TTCCGACACC TATGGGCGCT ACGCTTACGA TCAACAACCA AGTATTGGTT TATGGAATTT AAATGCTCTT GCGGCCGCAC TAAGCCCACT TATAGATCGA GATCAAGCGC GCGCGAGCTT AGAATCTTAC GAAGGAATAC TAACCAAAGA ATACAACAGC CGAATGACCA AGAAACTGGG GTTTTTATCT GCGAAGCAAG GCGACGCCAA GCTAATCAAC ACTATGTTTA TCCAGCTAGA GCAACTCCAA TTAGATTACA CTTTATTCTT TAGGCTGCTA GCCCTAGCCA AAGCGGATGA CCTTCAATCT TCGTTTATAC AACCGCTACT TGGTTGCGAC AACATAGCGA AAGGCGAACA GTTGGCTGCG TGGGCGGCTG AATATTTAAC TCGGCGGCAG CTGGAGGATG TGCCTCAAGC AACTATCACC GCAGACATGA ACCACCACAA CCCGATTTAC TGCTTACGCA ATTATTTTGC GCAACAGGCT ATTGATGAAG CTTATCAACA GGGTACCTAC AGCACGTTAG AAAAGCTCGC AGCGGTGTTA GCCGCCCCTT TTACCTCTCA CCCCAACGCT AGCGAGTTTG AAACCCCTCC TCCAAGTGAG CTAGCAAATA TAGCCGTAAG TTGCTCATCA TAA
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Protein sequence | MLEHLKFDNS FDKLGSDFAT RVNPRPLVNP KLVCVDSKTC ELLGISKDSV SSENGVNMFS GNRVPPQFAP LAMVYAGHQF GGYSSQLGDG RGLLLGELNT HSGKYDLHLK GAGKTPYSRF GDGYAVLRSC IREYLAGIAM RGLGIPTSHA LCVVRGDNAV TRETIEPAAT LTRVARSHIR FGSFEYFYYT QQHTQLEQLA DYAVEQYIPE YVDKDGRFNA LLHYTTEQTA KLIAAWQAVG FCHGVMNTDN MSIIGETLDY GPYGFMEAYN PTHICNHSDT YGRYAYDQQP SIGLWNLNAL AAALSPLIDR DQARASLESY EGILTKEYNS RMTKKLGFLS AKQGDAKLIN TMFIQLEQLQ LDYTLFFRLL ALAKADDLQS SFIQPLLGCD NIAKGEQLAA WAAEYLTRRQ LEDVPQATIT ADMNHHNPIY CLRNYFAQQA IDEAYQQGTY STLEKLAAVL AAPFTSHPNA SEFETPPPSE LANIAVSCSS
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