Gene Sde_2514 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_2514 
Symbol 
ID3968796 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp3184785 
End bp3186257 
Gene Length1473 bp 
Protein Length490 aa 
Translation table11 
GC content48% 
IMG OID637921605 
Producthypothetical protein 
Protein accessionYP_527986 
Protein GI90022159 
COG category[S] Function unknown 
COG ID[COG0397] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTAGAAC ATCTAAAATT CGATAACTCC TTCGATAAAC TAGGCTCAGA TTTCGCTACC 
CGCGTTAACC CAAGGCCATT GGTTAACCCT AAGCTTGTTT GTGTAGACTC AAAAACCTGC
GAACTATTGG GTATAAGCAA AGACAGCGTC AGCAGCGAAA ACGGGGTTAA TATGTTTTCG
GGCAATAGGG TTCCCCCACA ATTCGCTCCG CTGGCGATGG TTTATGCCGG CCATCAATTT
GGTGGGTATT CCTCGCAACT TGGGGATGGT AGGGGCTTAT TACTTGGTGA ACTAAATACC
CATTCAGGTA AGTATGACCT TCACCTAAAA GGAGCCGGCA AAACCCCGTA TTCTCGCTTT
GGTGATGGCT ATGCCGTGCT GCGCTCGTGT ATTCGCGAAT ACCTCGCTGG TATCGCTATG
CGTGGCCTAG GCATTCCAAC TAGCCATGCG TTATGTGTCG TACGCGGCGA CAACGCCGTT
ACCCGCGAGA CTATCGAACC CGCAGCTACA CTTACCCGAG TAGCACGCAG CCATATTAGG
TTTGGCTCGT TCGAGTACTT CTATTACACA CAACAGCATA CGCAATTAGA ACAACTAGCA
GACTATGCTG TTGAGCAATA TATCCCCGAA TACGTTGATA AAGATGGCCG TTTTAACGCC
CTGTTGCATT ACACCACCGA GCAAACAGCA AAATTGATAG CCGCGTGGCA AGCGGTGGGC
TTTTGCCATG GCGTGATGAA CACCGACAAC ATGTCTATCA TTGGGGAAAC CTTAGATTAC
GGCCCCTATG GCTTTATGGA AGCGTATAAC CCAACTCACA TCTGTAACCA TTCCGACACC
TATGGGCGCT ACGCTTACGA TCAACAACCA AGTATTGGTT TATGGAATTT AAATGCTCTT
GCGGCCGCAC TAAGCCCACT TATAGATCGA GATCAAGCGC GCGCGAGCTT AGAATCTTAC
GAAGGAATAC TAACCAAAGA ATACAACAGC CGAATGACCA AGAAACTGGG GTTTTTATCT
GCGAAGCAAG GCGACGCCAA GCTAATCAAC ACTATGTTTA TCCAGCTAGA GCAACTCCAA
TTAGATTACA CTTTATTCTT TAGGCTGCTA GCCCTAGCCA AAGCGGATGA CCTTCAATCT
TCGTTTATAC AACCGCTACT TGGTTGCGAC AACATAGCGA AAGGCGAACA GTTGGCTGCG
TGGGCGGCTG AATATTTAAC TCGGCGGCAG CTGGAGGATG TGCCTCAAGC AACTATCACC
GCAGACATGA ACCACCACAA CCCGATTTAC TGCTTACGCA ATTATTTTGC GCAACAGGCT
ATTGATGAAG CTTATCAACA GGGTACCTAC AGCACGTTAG AAAAGCTCGC AGCGGTGTTA
GCCGCCCCTT TTACCTCTCA CCCCAACGCT AGCGAGTTTG AAACCCCTCC TCCAAGTGAG
CTAGCAAATA TAGCCGTAAG TTGCTCATCA TAA
 
Protein sequence
MLEHLKFDNS FDKLGSDFAT RVNPRPLVNP KLVCVDSKTC ELLGISKDSV SSENGVNMFS 
GNRVPPQFAP LAMVYAGHQF GGYSSQLGDG RGLLLGELNT HSGKYDLHLK GAGKTPYSRF
GDGYAVLRSC IREYLAGIAM RGLGIPTSHA LCVVRGDNAV TRETIEPAAT LTRVARSHIR
FGSFEYFYYT QQHTQLEQLA DYAVEQYIPE YVDKDGRFNA LLHYTTEQTA KLIAAWQAVG
FCHGVMNTDN MSIIGETLDY GPYGFMEAYN PTHICNHSDT YGRYAYDQQP SIGLWNLNAL
AAALSPLIDR DQARASLESY EGILTKEYNS RMTKKLGFLS AKQGDAKLIN TMFIQLEQLQ
LDYTLFFRLL ALAKADDLQS SFIQPLLGCD NIAKGEQLAA WAAEYLTRRQ LEDVPQATIT
ADMNHHNPIY CLRNYFAQQA IDEAYQQGTY STLEKLAAVL AAPFTSHPNA SEFETPPPSE
LANIAVSCSS