| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2512 |
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| Symbol | |
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| ID | 3968794 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 3182790 |
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| End bp | 3184025 |
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| Gene Length | 1236 bp |
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| Protein Length | 411 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637921603 |
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| Product | periplasmic protein TonB links inner and outer membranes-like |
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| Protein accession | YP_527984 |
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| Protein GI | 90022157 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
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| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.929963 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGAAAC TGAAAATCAT CATTTCGGCA CTAGTTGTAA CTATAACTTA TACCCTGTTA
ACCCCTGCTA GCTTTGCTGC ACCGTTATTA AATGGTGTTG CCACTCAATC AGAGCTAGGT
AAAGAGCAGT TTATAGCCGG CCTTTTTACG TCAACCCTGG CCTCAGAAGC AAAAGATGTT
TTGGTAGCGC AAGAAGACAA GCGCATGCAA ATTCGCGTAA CTGCAGACCG TCTTTCCACA
CGACGTTTTA AGCGTTTATG GATTGAAGGT ATGGCAATTA ACGCAAGCTC TTCGGAGTTG
CAAAAGCATG CACAGCATAT GGCTGATTTT AGTAACATGC TTAAAATTAA GCTCATGGCA
GGTGATATTT TCACCATCGA TCGCACTGGC AGTACCGTTT TAATTTCATT AAATGGCGCG
CAGCTTGGTC AAATTCCAGA TCCAGCATTC TTTGACTTGC TGTTGCGTAC TTGGATAGGC
CCAGTCCCAT TATCTTCCGA CTTCAAACAA AACATGCTTG TGGCCGGTAA CGTAAACTCT
GGCTTGATTA CCCGCTTCGA AAGCACGCGT CCTAGCGATG AACGCATTGC AGCAGTAGAA
GACGCTGTTA AAGCACGAGC AAAACAAGCA GAAGCCCAAG AAGACGATTC AACACCGAAA
GTGGCAGTTG CTAAAACAGA TATTAAACCC AAAATTGAAG CCCCTGTGGC AATTGCCCCA
CCGCCCAAAA TTGCCGCCCC TTCTGGCGCT CTAGGCGAAA GCAAAACGGT TTCAACCCCT
AAACCAGAGC CAGCTAAACC TAAGCCACAA GAGCCTGAGC CGGCCCCTAA AGTGGAAGAA
AAGCCTAAGA TTGCTGCTAT TACACCTCCA CCACCAGAAA CTCTGCTGGA TGAAGAAAGC
CTTGAGGACG AAGAAGACGA TTTAGATTTC ACCGCGGAAA GCTTACTTAG CCAACAGCTA
TACATTGCAA AGCTAAAGCG CTGGTCTTCA TCTAAGCTTA AATACCCATC GCGCGCAGCT
AGCCGTGGCC ACGAAGGCAA CGTGCGCTTA AGCATCGTAA TCGATCGCTC TGGTAAGGTT
AAAAAAGTAG AAGTGATTGA AGCCGCCGAA TACAGCAGCT TGACGAAAGA AGCGCAAAAC
GCAGTAGAGC GCGCTAACCC TTTCCCACCA ATGCCCGAAG ATGTAAAAGG TGATACTTTC
TTATTCACCT TACCCGTAGT TTTCCAACTA CAGTAA
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| Protein sequence | MQKLKIIISA LVVTITYTLL TPASFAAPLL NGVATQSELG KEQFIAGLFT STLASEAKDV
LVAQEDKRMQ IRVTADRLST RRFKRLWIEG MAINASSSEL QKHAQHMADF SNMLKIKLMA
GDIFTIDRTG STVLISLNGA QLGQIPDPAF FDLLLRTWIG PVPLSSDFKQ NMLVAGNVNS
GLITRFESTR PSDERIAAVE DAVKARAKQA EAQEDDSTPK VAVAKTDIKP KIEAPVAIAP
PPKIAAPSGA LGESKTVSTP KPEPAKPKPQ EPEPAPKVEE KPKIAAITPP PPETLLDEES
LEDEEDDLDF TAESLLSQQL YIAKLKRWSS SKLKYPSRAA SRGHEGNVRL SIVIDRSGKV
KKVEVIEAAE YSSLTKEAQN AVERANPFPP MPEDVKGDTF LFTLPVVFQL Q
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