Gene Sde_2485 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_2485 
Symbol 
ID3968562 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp3137669 
End bp3138094 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content44% 
IMG OID637921576 
Productphospholipid/glycerol acyltransferase 
Protein accessionYP_527957 
Protein GI90022130 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0848] Biopolymer transport protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000000540401 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTCGCA GAAAGAAAAA ACAACAATCG GATGATAATT CAGAAATCGA CTTAACGCCC 
ATGCTGGACG TTGTGTTTAT TATGCTTATC TTCTTTATCG TAACGGCATC GTTCGTTAAA
GAAAAATCGT TAGGCTTGAA CGTGCCGGAG GATTTAGACA ATCCACCACC ACCCAACCCT
GACAACAAAA GTATTCTTAT TCAGGTAACG TCTAGTGACG AGATCTACAT CGATCAGCGC
CGCGTAGATG TACGTTCTGT GCGTTCTGTA ATTGCTCAGA AGCACGCAGA GATTCCAGAG
GCACCAGTAG TTGTACGCGC ACACGAACTG TCTACTGCGC AAACCTACGT TGCCATTGCT
GATGCCGCGC GCGAAGCAAA AATTTATAAC GTATCACTTG TACCTTTTGA CGATAAATCT
AAATAA
 
Protein sequence
MSRRKKKQQS DDNSEIDLTP MLDVVFIMLI FFIVTASFVK EKSLGLNVPE DLDNPPPPNP 
DNKSILIQVT SSDEIYIDQR RVDVRSVRSV IAQKHAEIPE APVVVRAHEL STAQTYVAIA
DAAREAKIYN VSLVPFDDKS K