| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2471 |
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| Symbol | |
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| ID | 3964918 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 3121856 |
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| End bp | 3122482 |
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| Gene Length | 627 bp |
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| Protein Length | 208 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637921562 |
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| Product | sigma-24 (FecI-like) |
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| Protein accession | YP_527943 |
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| Protein GI | 90022116 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.0956767 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTCGCAT CAACAACTTC TAGGCAAAAA GGCCCCGAAA GACGGATGGA TACAGACTAC
CGTAGAGACG ACAATTGGTC AGGTTTGCTT GAGCGAGTAG CAACAAGCCA AGATCAAACG
GCATTTGCAG CCCTTTTTGA GCATTTCGCC CCCCTAATAA AGGGCTTTTG CCAAATGCAT
GCTTCTGGTC TTAGTGGCGA GAATGCAGAA GAGCTTGTAC AAGAAGTGAT GTTTAAAGTT
TGGCAAAAAG CCCCCTCCTT TGATGCGCGT AAATCCGCTG CCAGTACCTG GGTATTTACC
ATTGTGCGCA ACACGCGTAT CGACTATTTG CGCAAAAACA GTAAGCACAC AACAAATATA
GTAGATGGAT TAGAAGCCGA TGATATTTGG GACGAAAGCC TAGACCACCA ACCCTTTGTA
TATTTACAAC AAGCGCGCGA TACAGAGAGT GTGCGCGACT TTTTAAGCAC GCTCCCCGAA
GATCAGTCGC ACTGCCTGAA AAAGGTATAT ATGGAAGGTA AATCACACAC AGAAATATCG
GAAGAACTAA ACCTTCCGCT AGGGACAGTC AAATCCCGAG TTCGATTGGG GCTTAAAAAG
CTTCAATCTT GCGTAGGAGG CAAATAA
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| Protein sequence | MLASTTSRQK GPERRMDTDY RRDDNWSGLL ERVATSQDQT AFAALFEHFA PLIKGFCQMH
ASGLSGENAE ELVQEVMFKV WQKAPSFDAR KSAASTWVFT IVRNTRIDYL RKNSKHTTNI
VDGLEADDIW DESLDHQPFV YLQQARDTES VRDFLSTLPE DQSHCLKKVY MEGKSHTEIS
EELNLPLGTV KSRVRLGLKK LQSCVGGK
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