| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2469 |
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| Symbol | |
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| ID | 3964916 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 3120444 |
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| End bp | 3121241 |
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| Gene Length | 798 bp |
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| Protein Length | 265 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637921560 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_527941 |
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| Protein GI | 90022114 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACTT CATCTGGCTT AACGATTTCG AACGCTACCG TCTGGGTGAC TGGGGCAAGC
TCTGGTATTG GCAAAGCATT GGTGCATCAG CTAGCACAGG CTAATAATTT TATTATTATC
AGCGGTCGCA ACGAAGCATC GCTATCGGCA TTAGCCGCTA GCGCCCAAGG CAATATAGTC
GCGTTACCAT TTGATGTTGC CGATGCAAGT AGTCACGCCA TGGTGAAGGC GCGCCTAGGA
GCATTAACCG ACCATATAGA TATAGCAATT TTGTCTGCCG GTACTTGCGA ATATGACGAT
GGCCCCACCT TAGATGAAAA TATGTATAAG CGAGTAATGG ATACAAATTT TTTTGGGGCA
GTAAATACCG TTCGGCTAGC GTTACCTTTT TTGCAAAGTG CCACTAAAAA TAAAGTGCGA
CGACCTAAAA TAGTCGCGGT AAGTAGCATG GCGTGCATGG CTGCTTTCCC ACGTGCGGAA
GCCTATGGTG CCTCCAAAGC TGCATTGGAA TATTTTATTC AGTCGTTAGC GGTAGATTTA
AAAAGCCAGA AAATAGACGT GGCTATTGTG CGCCCAGGCT TTGTAGACAC CCCGTTAACA
CGAAAAAATG ATTTTGATAT GCCGTGGTTG ATGGCGCCCG AAGAAGCCGC CAATAGAATA
TTACGCAATT TGAAAAAGAA TAAGCTCTTT ATACATTTTC CGTGGCCAAT GGCTATGCTT
TTAGGTGTAG CAAAGTTATT CCCTAGTTTG TGGCTGCATT ACATCGCCCC CAAATTAACC
AAGAAAGAGG CGTTTTAA
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| Protein sequence | MKTSSGLTIS NATVWVTGAS SGIGKALVHQ LAQANNFIII SGRNEASLSA LAASAQGNIV
ALPFDVADAS SHAMVKARLG ALTDHIDIAI LSAGTCEYDD GPTLDENMYK RVMDTNFFGA
VNTVRLALPF LQSATKNKVR RPKIVAVSSM ACMAAFPRAE AYGASKAALE YFIQSLAVDL
KSQKIDVAIV RPGFVDTPLT RKNDFDMPWL MAPEEAANRI LRNLKKNKLF IHFPWPMAML
LGVAKLFPSL WLHYIAPKLT KKEAF
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