Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_2441 |
Symbol | |
ID | 3965388 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 3086110 |
End bp | 3087021 |
Gene Length | 912 bp |
Protein Length | 303 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637921532 |
Product | ornithine carbamoyltransferase |
Protein accession | YP_527913 |
Protein GI | 90022086 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0078] Ornithine carbamoyltransferase |
TIGRFAM ID | [TIGR00658] ornithine carbamoyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.617876 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.127265 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTAAAC CAAGACACTT TTTAACACTA GAAGACCTTT CTGCAAAAGA ATTAGAAGAG GTTATTCAGC GCGCTATTGA TTTAAAAGCC CAACACAAAG CGGGCACCAC TGATGAGCCC TTCAAAAACC AAGTACTGGG GATGATATTT GAAAAATCAT CCACGCGTAC GCGAGTGAGC TTTGAAGCAG GTATGGCTCA ACTAGGTGGC AGCGCAATAT TTTTAAGCTC TCGCGATACA CAGCTTGGCC GCGGTGAACC TATTGAAGAC TCCGCGCGTG TACTATCACG CATGGTAGAC ATTGTTATGA TCCGCACTTT CGAGCACTCG ATTGTAGAAC GATTTGCGGA ATATTCGCGC GTACCGGTTA TGAATGCGTT AACAGACGAC TACCACCCCT GCCAATTGCT AGCCGACATT CAAACGTTTG TTGAACACAG AGGCAGCCCC AAGGGTAAAA CAGTAGCTTG GGTTGGTGAT GGTAACAACA TGTGCCATTC ATACATTAAC GCCGCAAAGC TTTGCGACTT TAAACTACAA ATTGCCTGCC CCGAAGGCTT CGATCCAGCC CCTCAGCTTA TTGCAGAAAA CAGTGACCGC GTAACCGTTA CCCGCATTCC TGAAGAAGCT GTAAAAAATG CCGATTGGGT AGCCACAGAT GTGTGGGCAA GCATGGGCCA AGAAGACGAG AAAAAGAAAC GCTTAGCCGC TTTTGCTGGC TACGAAGTGA ATCATAAGCT TATGAGTCAC GCCAAAAAAG ACGCAATATT CATGCACTGC TTACCTGCCC ACAGAGGCGA GGAAGTTAGC GCAGAATTAT TAGAAGACGA AAACATATCG GTAGTATGGG ATGAAGCCGA AAATAGACTA CACGCACAAA AAGCCCTTAT GCTATTTTTA ATGGGTAAAT AA
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Protein sequence | MTKPRHFLTL EDLSAKELEE VIQRAIDLKA QHKAGTTDEP FKNQVLGMIF EKSSTRTRVS FEAGMAQLGG SAIFLSSRDT QLGRGEPIED SARVLSRMVD IVMIRTFEHS IVERFAEYSR VPVMNALTDD YHPCQLLADI QTFVEHRGSP KGKTVAWVGD GNNMCHSYIN AAKLCDFKLQ IACPEGFDPA PQLIAENSDR VTVTRIPEEA VKNADWVATD VWASMGQEDE KKKRLAAFAG YEVNHKLMSH AKKDAIFMHC LPAHRGEEVS AELLEDENIS VVWDEAENRL HAQKALMLFL MGK
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