| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2422 |
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| Symbol | |
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| ID | 3966642 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 3064521 |
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| End bp | 3065993 |
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| Gene Length | 1473 bp |
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| Protein Length | 490 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637921513 |
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| Product | cbb3-type cytochrome c oxidase subunit I |
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| Protein accession | YP_527894 |
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| Protein GI | 90022067 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG3278] Cbb3-type cytochrome oxidase, subunit 1 |
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| TIGRFAM ID | [TIGR00780] cytochrome c oxidase, cbb3-type, subunit I |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.505766 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAGCG ATCAGGCTTC CCATTCGGGG CTTGAATCTA GCGCGGGAGC GACTCCTGCG
TTGGACGATA AATATAATTA CCAGGTGGTG CGGCAGTTCA GCGCCATGGC AATTGTTTGG
GGTGTGTTTG GCATGGGTAT GGGGGTGCTT ATCGCCGCCC AGCTAATGTG GCCAGAACTC
AACGACTTTT TCCAACCATA CAGTCACTTT GGACGACTTC GCCCATTGCA TACCAACTCG
GTAATTTTTG CATTTGGTGG CTGTGCGTTG TTTGCAACCT CGTACTATGT GGTGCAGCGC
ACCTGTCAGG CAAAACTGTT TGGTGGCTTT TTAGTGCCGT TTACCTTTTG GGGTTGGCAG
TTAGTTATTG TTTCTGCTGC TATTACTTTG CCAATGGGGT TAACTACTAC CAAAGAATAT
GCCGAACTAG AGTGGCCAAT TGATATTCTT ATTGCGTTAG TGTGGGTCTC TTACGCTATT
GTGTTTTTTG GCACCATTGT TAAGCGTAAG ACCTCGCATA TTTACGTAGC TAACTGGTTC
TTCGGTGCAT TCATCGTAAC TGTTGCTATT TTGCATATCG TTAACAGTGC GGCTGTTCCC
GTATCGCTTA CTAAGTCTTA CTCTGCCTAT GCTGGCGCCA TGGATGCGAT GATCCAATGG
TGGTATGGCC ACAACGCTGT GGGCTTCTTC TTAACAGCGG GCTTCTTGGG CATGATGTAT
TACTTTGTGC CTAAGCAAGC GGATCGTCCG GTTTATTCCT ACCAGCTTTC TATTGTTCAC
TTCTGGGCTC TAATTTCTAT CTATATTTGG GCTGGTGCTC ACCATTTGCA TTATTCTGCG
TTACCCGACT GGGCACAGTC TTTAGGTATG GTGATGTCTT TGATTCTGCT AGCGCCTTCT
TGGGGTGGCA TGATTAACGG TGTAATGACT CTTTCTGGCG CGTGGCACAA ATTGCGCACC
GACCCAACAT TGCGTTTCTT AGTGGTTTCA TTGTCGTTCT ACGGTATGTC TACCTTTGAA
GGCCCAATGA TGTCTATTAA GACTGTAAAC GCCTTATCGC ACGATACCGA TTGGACTATT
GGTCACGTAC ACGCAGGTGC ATTAGGTTGG GTTGCAATGA TTAGCTTTGG TGCCTTGTAC
CACATGATTC CAATCTTATC TCGCAAAGCC ACTATGTGGA GTGTGAAGCT TATTAACACG
CACTTCTGGT TAGCTACCGT GGGTACTGTT TTATACATCT GCTCTATGTG GGTAAACGGT
TTGATGCAGG GCATTATGTG GCGTGCATAC AACGCCGATG GCAGCTTGAC TTACAGCTTT
GTTGACTCTG TTGAAGCGAG CTACCCAGGT TACTTTGTTC GTTTTCTTGG CGGTGCGTTT
TTCTTAGTTG GTATGTGCTT AATGGCGTAT AACGCCTACC GCACTATGAA CGATGCAGAA
GAAGAAACCG TTGCAGAACC AGCGCAAGCC TAA
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| Protein sequence | MTSDQASHSG LESSAGATPA LDDKYNYQVV RQFSAMAIVW GVFGMGMGVL IAAQLMWPEL
NDFFQPYSHF GRLRPLHTNS VIFAFGGCAL FATSYYVVQR TCQAKLFGGF LVPFTFWGWQ
LVIVSAAITL PMGLTTTKEY AELEWPIDIL IALVWVSYAI VFFGTIVKRK TSHIYVANWF
FGAFIVTVAI LHIVNSAAVP VSLTKSYSAY AGAMDAMIQW WYGHNAVGFF LTAGFLGMMY
YFVPKQADRP VYSYQLSIVH FWALISIYIW AGAHHLHYSA LPDWAQSLGM VMSLILLAPS
WGGMINGVMT LSGAWHKLRT DPTLRFLVVS LSFYGMSTFE GPMMSIKTVN ALSHDTDWTI
GHVHAGALGW VAMISFGALY HMIPILSRKA TMWSVKLINT HFWLATVGTV LYICSMWVNG
LMQGIMWRAY NADGSLTYSF VDSVEASYPG YFVRFLGGAF FLVGMCLMAY NAYRTMNDAE
EETVAEPAQA
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