Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_2404 |
Symbol | |
ID | 3966061 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 3048189 |
End bp | 3048836 |
Gene Length | 648 bp |
Protein Length | 215 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637921495 |
Product | electron transport complex protein RnfG |
Protein accession | YP_527876 |
Protein GI | 90022049 |
COG category | [C] Energy production and conversion |
COG ID | [COG4659] Predicted NADH:ubiquinone oxidoreductase, subunit RnfG |
TIGRFAM ID | [TIGR01947] electron transport complex, RnfABCDGE type, G subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.59015 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTTAGGAA AGTCTATAAC TAAAAACAGT GTGATTTTAG GCGGGTTCGC CTTGGTTACC GCAGCGATTT TGGCCTTTAC CTTCCAAGCA ACTGCAGAAA AAATTGCAGA GCAAGAGAAG CGAGCAGCAG AAAAAGCCCT ACTACAAATA GTGCCGCGCG AGCGTCACGA TAACGATATG CTGTCAGATA CATTAACCTT CTCGGCTGAG CAATCTGCTG TATTAGGTGT AAAAGGCCCT GTGGATGTCC ACCTTGCTAA ACTCGATGGC GAATTGGTTG CTGCAATCAT TCCAGCGATC GCGCCAGATG GTTACAGTGG AGAAATTAAA CTTATTGTTG GTGTAAATGC CGATGGGTCG GTTGCCGGTG TACGCGTACT CGCCCACAAA GAAACCCCTG GGCTAGGCGA CAAAGTAGAC CTAAACAAAA GCGACTGGGT ATTAAGCTTT ACCGGTAAAT CACTACTTAA CCCAACAGCC AACAAGTGGA AAGTAAAGAA AGATGGCGGT GAATTTGATC AATTTACCGG CGCAACCATT ACACCGCGCG CAGTAGTAAA ACGCGTTCAA CACGTTTTGG AATTTTTCGA AGCCAACAAA GCTGCTCTCA CCCAAAACAC ACCCGCTGCA CCTGCAGCTA TAAACTAA
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Protein sequence | MLGKSITKNS VILGGFALVT AAILAFTFQA TAEKIAEQEK RAAEKALLQI VPRERHDNDM LSDTLTFSAE QSAVLGVKGP VDVHLAKLDG ELVAAIIPAI APDGYSGEIK LIVGVNADGS VAGVRVLAHK ETPGLGDKVD LNKSDWVLSF TGKSLLNPTA NKWKVKKDGG EFDQFTGATI TPRAVVKRVQ HVLEFFEANK AALTQNTPAA PAAIN
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