Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_2396 |
Symbol | dcd |
ID | 3967916 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 3038418 |
End bp | 3038987 |
Gene Length | 570 bp |
Protein Length | 189 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637921487 |
Product | deoxycytidine triphosphate deaminase |
Protein accession | YP_527868 |
Protein GI | 90022041 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0717] Deoxycytidine deaminase |
TIGRFAM ID | [TIGR02274] deoxycytidine triphosphate deaminase |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.181474 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTATTA AATCCGATAA GTGGATTCGC CGTATGGCAG AAAACGAAGG GATGATCGAT CCTTTTGAGC CGGGCCAGGT TCGTTATAAC GCTGATGAGC AGCGTTTGAT TTCGTATGGT ACCTCTAGCT ATGGCTATGA TGTGCGCTGT GCGGATGAGT TTAAGATATT TACCAATGTG CACTCTGCTA TTGTAGATCC GAAAAACTTT TCGGATGACA GCTTTGTAGA TGTGAAGAGC GATGTGTGTA TTATCCCTCC CAATTCATTT GCATTGGCGC GAACAGTAGA ATATTTCCGT ATTCCACGAA GCGTGCTTAC TGTGTGTTTG GGTAAGTCTA CCTATGCGCG CTGCGGTATT ATTGTAAACG TAACGCCGCT AGAGCCAGAG TGGGAAGGTC ACGTAACACT TGAGTTTTCT AACACTACAC CTCTGCCTGC AAAAATTTAT GCGAATGAAG GTGTTGCTCA AATGTTGTTT TTTGAGAGTG ATGAAGTGTG TGAAACATCC TACGGTGATC GCGGTGGCAA ATATCAAGGT CAGCGCGGGG TGACATTGCC ACGCACCTAG
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Protein sequence | MSIKSDKWIR RMAENEGMID PFEPGQVRYN ADEQRLISYG TSSYGYDVRC ADEFKIFTNV HSAIVDPKNF SDDSFVDVKS DVCIIPPNSF ALARTVEYFR IPRSVLTVCL GKSTYARCGI IVNVTPLEPE WEGHVTLEFS NTTPLPAKIY ANEGVAQMLF FESDEVCETS YGDRGGKYQG QRGVTLPRT
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