| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2394 |
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| Symbol | sbcB |
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| ID | 3967914 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 3036081 |
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| End bp | 3037538 |
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| Gene Length | 1458 bp |
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| Protein Length | 485 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637921485 |
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| Product | exonuclease I |
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| Protein accession | YP_527866 |
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| Protein GI | 90022039 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2925] Exonuclease I |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.00869913 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCAAAAAA CATTTTATTG GCACGACTAC GAAACATGGG GCGCAAACCC TGCTGTAGAT
CGGCCTAGCC AATTTGCTGG CGTGCGCACC GATATGGATC TAAATATTAT TGGCGAGCCA
CTGGTAATAT ATTGCAAGCC ACCAGAGGAT ATTTGGCCTA ACCCCGAAGC CTGTTTAGTG
ACAGGGCTTA CACCGCAAGA AACCCTCGCT AAAGGCGTAA CTGAGCGCGA ATTTATTAAA
CAAATACATC GCGAATTGGC CAAACCGGGC ACCTGTGGTG TGGGCTATAA TTCTATTCGT
TTTGATGATG AAGTTACCCG TTATACGTTG TACCGCAATT ATTTTGACCC CTACGAGCGC
GAGTGGCGCA ACGGTAATTC GCGCTGGGAT ATTATTGATA TGGTGCGCCT ATGCTATGCA
TTGCGGCCAG AAGGCATAGA ATGGCCGGTT GTGGACGGCA AGCCAAGTTT TAGATTAGAA
AACTTAACTA AAGTAAATGG CATTGTGCAT GCGTCGGCGC ACGATGCGTA TTCCGATGTT
GAGGCTACCA TTAAACTGGC GCGTTTGGTT CGTGAAAAGC AGCCTGCTTT GTATGAGCAT
GTTGTCAATA ATCGCGGTAA GCGTGAGGCA ACTAAGTTGT TGGATGTGGC AAGTAAAAAG
CCAATGCTAC ATATCTCATC AAAGTTTTCA TCCGAAAATG GCTGTGCCGG TTTGATAGCG
CCTTTGGCTT ATCATCCCGT TAACAAAAAT GCAGTAATAG TTATTAATTT AAATGCCGAC
CCGAAACCAC TTTTTGATTT GTCTGCAGAT GAGATTAGAG CGCGTATATT TACCGCAACC
AAAGATTTAC CCGAAGGCGT AGAACGCTTG CCGGTTAAGT TAATTCATTT AAATAAATGC
CCCATACTTC TAACGCCTAA AATACTAGAC GAACAGGCGC AGGCGCGATT GGGTATAGAT
AAGGCACAGT GCGAAAAGCA TTGGTCGCAG TTGCAGCGTA TGGATATAAC AGAAAAGCTG
CAGCAGGTAT TTGCCACAAA CGAGTTTGAA GGTAGCTTAG ACCCAGAGCG TATGCTGTAC
GACGGCTTTG TGGGTGACAC AGATAAATAC GTAATGGCAG ATGTGCGCAA GGCGAATGGC
GCGGAACTAT CGAAACACAA TTTTGTATTT AGTGATAAGC GGTTAAACGA TATGTTGCTG
CGTTATAAGG CGCGTAATTT TCCTGACGAT TTAACCGATA GCGAGCGGGC CGAGTGGCGA
GAGTTTGTAA GCCAGCGGTT AAAAGACGGT GGCGATGGGG TGTTATCGTT AAGCGAGCTA
AACGACAAGC TTGTAAATAT ACGAGCAGAG CTAGAGCAGC AGCAAGACCA AAGCCCAGAG
CAAATAGCTA AAAAATTAGA TATTATTAAA GCGCTGGAGC AATACGTAAG TAAACAAAGC
CAATTAATAA TAAGGTAG
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| Protein sequence | MQKTFYWHDY ETWGANPAVD RPSQFAGVRT DMDLNIIGEP LVIYCKPPED IWPNPEACLV
TGLTPQETLA KGVTEREFIK QIHRELAKPG TCGVGYNSIR FDDEVTRYTL YRNYFDPYER
EWRNGNSRWD IIDMVRLCYA LRPEGIEWPV VDGKPSFRLE NLTKVNGIVH ASAHDAYSDV
EATIKLARLV REKQPALYEH VVNNRGKREA TKLLDVASKK PMLHISSKFS SENGCAGLIA
PLAYHPVNKN AVIVINLNAD PKPLFDLSAD EIRARIFTAT KDLPEGVERL PVKLIHLNKC
PILLTPKILD EQAQARLGID KAQCEKHWSQ LQRMDITEKL QQVFATNEFE GSLDPERMLY
DGFVGDTDKY VMADVRKANG AELSKHNFVF SDKRLNDMLL RYKARNFPDD LTDSERAEWR
EFVSQRLKDG GDGVLSLSEL NDKLVNIRAE LEQQQDQSPE QIAKKLDIIK ALEQYVSKQS
QLIIR
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