Gene Sde_2380 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_2380 
Symbol 
ID3967374 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp3018656 
End bp3018982 
Gene Length327 bp 
Protein Length108 aa 
Translation table11 
GC content48% 
IMG OID637921471 
Productglyoxalase I 
Protein accessionYP_527852 
Protein GI90022025 
COG category[S] Function unknown 
COG ID[COG3098] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00500011 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGATTTAC GCGCTAACCA GCTGCTGAGT TTACTGATGG ATTTGGAAAT GCATTTGCGC 
TCGGCAAGCT TATGGCAGGC ACAATTACCT TCGCAGGCAG CACTTGCTAG CACCCAGCCA
TTCTGTGTGG ATACGCTAGA GTTTCAGCAG TGGTTGCAGT TTGTGTTTAT TCCCCGTTTA
CGCGTTTTAG CAGAAACCGG CCAGCCACTA CCTTTGCTGT GCAATGTGGC GCCAATGGTA
AGCGACGGTG ACGTATTTAC TGGTGTCAAT GCACGAGCAG AAATTGTTCA CACGCTAGAG
CAAATAGACG CACTAATTTC TAATTAA
 
Protein sequence
MDLRANQLLS LLMDLEMHLR SASLWQAQLP SQAALASTQP FCVDTLEFQQ WLQFVFIPRL 
RVLAETGQPL PLLCNVAPMV SDGDVFTGVN ARAEIVHTLE QIDALISN