| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2375 |
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| Symbol | |
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| ID | 3967369 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 3006520 |
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| End bp | 3013038 |
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| Gene Length | 6519 bp |
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| Protein Length | 2172 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637921466 |
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| Product | glucose/sorbosone dehydrogenases-like |
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| Protein accession | YP_527847 |
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| Protein GI | 90022020 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2133] Glucose/sorbosone dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.842796 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.181989 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTGTTT CGTTTGTAAG TGTTGTTACC AAGTTGATGT GTGCAATGCG TTGCCCGCTT
GGGCGGCGAA TAAGTTGGAT GTTAGTTTTT ATTGCGGCTG CATTGCCGCA AGCTAGCTGC
GGGCAATCTA ATCTGTGGGA GAGTGCCTAT TTTAGGGGTA CACCAAACGA TTGGAATGCT
AGCGCTATGA CCTTTAATGC AGAGAAGGGC GCTTGGTACA CAAGGCAAAC ATTTGGTGCA
GACAACCCCC GTTTTAAAAT AACTAAAAAT AATAATTGGG ATGAGTCTTA CCCTGCGAAC
GACTTTTTAA TTACACACGG CGCTGGCGAT TACGATATTT TATTCAACGA TGCAACCAAA
GCCATTACCG CGACTAAGGT AGTAACTTAT TCTGCGCCAA TAAGTGAGAA TTCCATTTGC
TTTGCTAACA CCTCAAATTT TGCTACACCG AACGTATATT TTTGGAACGC GGCGCCGGCT
AACAGCTTAA CAGGGGCGCC AGCCTGGCCG GGCGAAACAA TGGCAGCGGT ACAATACGAG
GCGGGTGCAT ATTATTGCTA TACCTTGACG GACTACTTAA CTGGCCAAAC AATGCCGAAT
TCGCTAAGTG TTATTTTTAG CAACGCTGGG GCGAATCAAA CCAACGATTT ATTCACTGAT
AACGGCTATT GCTTTAAAAA TAATATGTGG CAGAGCTTAA CCGCCTGCGG AATAGAGATT
GTTCCGGTAG AAGAACTACT AATAGCCAAT GCCGGTAACG ATAGAGAAAT AGAAGAAGGT
AATACATTAA CGCTAAGTGC GGCGGCATCT GAAGGCAATT ACACCAATGC TATTTGGCAG
AGCGATGCAT GGCAGGGCTC GTTAACAGGT GCAGAGGTAA CCACGCCGTT ATTAAATGAA
CCTGGTGTAT ACACTGTAAC TTTAACGTTA GAGGGACAAG CCTTAACCAG CAGCGATTCG
TTTACCCTTA CTGTTACAGC AAAGCCTGAA GTTAATACTA GTAATAATAT TTGTTTTGAT
AACATTCAAA ATTTCGCACA GCCTACAATT TATTTTTGGA ATGCAACGCC GGCTGGTTCG
TTAAATGCGC TACCCAATTG GCCAGGCCAT GCCATGGCGG TAGTGGGTAA TTATGTTTGC
TATGACTTCA CCGACATAAT AGTTAGCGGC GCTGCAATGC CCAGTGCGTT AAATGTAATA
TTTAGCAATA GCGGCAATAA TCAAACTGAA GATTTATTGT TCGATGGCAA TGCGTGCTAC
GCCGCCAGTA CATGGCAAAG CATGGCAGCG TGCGGTTTTG AACCCAAACC TGTACTGATT
GCCGAAGCGG GTGAAAATCA AACCGTACAA GCAGGTTCCA ATACTGTACT TTCTGCCGCC
GGCTCTCAGG GCCAGTTTGA AACGGCTGTA TGGCAAAGTA GCGCTTGGGC AGGGGAAATA
AATGGTTCAC CAGCGGTTAC ACCTAATTTA GCGGTAGTGG GCGAGCACAC AGTAACCTTA
ACGATTGCCA ATGGTGAAAC CACCGCGCAA GACACCTTCA CCCTAACGGT AACCGCAAGG
CCAACAACCC ACGGCATGAC CGAACGCCCC CTGCTGAGTG AGCCACTGGC GTTTCCTGTT
TCTGGCAATG TATCTGCCGG TGCCTACCGT TTCGAAAAGG CTTTCCCTAA TTTAGAGGGT
CAGTTTTTAT CGCCGGTAAT GATTTTACCC GATGGTATTA ACGATTTAAT TTTTGTAGTA
GATAAGCCCG GGTCAATCTT TGTTTTCCCT AACGATGAAA ATGTTGCCCC TAATCAAGTA
CATGAAATAC TGGATATAAA AAATAGCGTA CGCAACTACC ACGAGCAGGG TTTGCTGAGC
ATGGCATTCG ACCCGAACTA CGCGTCGAAT GGGTTTATTT ATATTTATTA TATTCATGGC
GAAGACGACA ACGAACGAGC GCCAGATGGC CAATATGGCG ATGCAATACT TGAACGCTAC
ACCATTAATG ACCCACTAAA CCCTACATCG GTAGTGGCTG GGTCTAACGT GGAGGTACTT
CGTGTACCAC AGCCGGGGCC AGATCACAAA GGCGGCATGA TGCAGTTTCA TGCGGAAGAG
GGCTATTTGT ATTTAAGTAT TGGCGACGGC GCCTATGGCC ACAGTGCGAT TGAATCCTTC
CCTGAAGACC CGCGCACAAA TAACAGCGCG CAAGATACTA CCAACTTGCG CGGGAGTATG
ATTCGAATTC AACCGCTAGA GTTTCCAGTC GATGGCAAAT ACTATGCGGT ACCCAGCGAT
AACCCGTTTG TAGGCATGGG CAACTACCGC CCAGAAATAT GGAGCTACGG CCATCGCAAC
CCATGGCGTT GGGCATTCGA CACAGAAGCG CCTTACACCA TTTGGCAAAC CGAAGTAGGC
CAAGCGGGCT TCGAAGAAGT AAACCTAATT CAAAAGGGTA AAAATTACGG TTGGCCTATT
TGTGAAGGCT TAACTAATCG CGGCGCCTTA GGTGGTGATG CCAGTAAAAG TTGTGCAACA
GATTTCGAAC CGCCACGCGA AGGTTATTTT CAGCCAGAAG GCTTTTCGAT TATTGGCGGC
ATAGTGTATC GCGGTAATAA ATTGCCCAAT CTTACAGGTC ACTTTATATT TGGCGATTAC
GTTACTAAGA AAATTTGGTC GATAGTGGAT GGCGACGCTA AGCAATTGGT TAGCGATGCA
TTTCCAGAAA ATATTGTATC GTTTGGTACC GATCTAAGTG GTGAGGAATT ATTCGTATCT
ACCTATGGGG TAGAGTACGG CGGTAACTCC ACCATTTACA AAGTTGTAGA TGACGACGCA
GAAGCCGCCG TAATTCCACA AACACTTTCT GCTACTGGCT TATTTGCCGA TTTAACCACG
CTTACGCCTG TTTCTGGTGT AATTGAATAC GATGTAAATA CCGATGGCTG GTTTGATGGC
GCCATTGCGC GGCATTTTAT TTCTATACCC AACGATACAA CTATTGCGTT TAACTCTGTA
GAAAACTGGC AATTACCTGT AGGGGCGGTG CTGGTAAAAC ACTTAAGTGT AATGGGCGAA
AATAATAGCC AAATACCTTT TACTACATCG GTATTGTTTA AACAGCAAAG TGGTAACTGG
CAGGCGGCGA ACTACCATTG GAATGAAGCT GGCACCGAAG CCACCCTGGT TACACAAACC
ATTAATGTTA CAGATAATGG AATAGAGCCT CGTACGCGCG CGGTGCAATC CGCGGGGGAC
TGTGGTTCGT GTCACACGGG TAGTGGCAGT AAAGATCCGC TCGCCTTGCA CACGCGCCAA
TTAAATAAAG TATTTGATTA CAGCGGCGTG CTAGATAACC AGCTCGATGC CTTTAATTAT
GTGGGCTTGT TCGATCAAAC CATCAATAGC GGCAGTGATT ACAATGTATT TGCCGCAATA
GATGACGAAA CTTCATCTAC ATCTTTGCGT GCACGATCCT ATATGGATAC CAACTGTTCA
CACTGTCATT CCAGCAGTTT TATGGATTTG CAGTTTGACA CGCCTTTAAT GGAAACGCGT
TTACTTGATG TGCAAACCAC TAGCGACAAA GTGCGTTTGC GTCCTTTCGA TCACGCCAAC
AGCTTGGTAT ACATTTATCA AACCTCCGAT GGCAACCGAA TGCCAAAAGG CTCACGCTAT
ACCAATCCAT TGGCGCAGAC CGTATTTGAG CAATGGATTA ACGCAGAGGA TGCTACTCAA
GTAGGCGTTG AACTGTTTAG CAGCGGTACA CGCTTTGCGG TGGGAGATAG TGTACGGTTA
GATGTAAAAG CACTTTACGA TAACGAATTT CCGCTCGACA ACCTCGACCC AGTTATATGG
GGTAGCAGTA ATAATGCCGT TGTTAGTGTG GCAAACACCG ACGAAAATAC CCAAACGCTT
GCATTAAACA CTGTGGGCAC CGCAACCGTA ACCGTGCAAG CTGGCGCTTA TTCTGATCAG
ATTTCAATTA CCGTCACAGA TTCCGATGCC TCAATTGTTG GCTTAGAAAT ATTCCCGGCC
GACATAGCGT TAGCACAAAG CCAGCAATTA GTTGCCTATG GTTTACGTGC CGATGGCTCG
CGTGTGAATT TGTATGGCGA AGTTACCTGG TCGGTAAGTG CCGGTGCAAG TAATGTAGCT
GTGGATAGCA CGGGTTTATT AACGCGCGCG GCAGAAGGTG AGGCAACCGT AACGGCCAGT
TACGCCGACT TAATTGCAGC TTCACAGATA ACCAATGCCC AGCAAGACTT TGTGCTGCAA
TACAACAATA CCACCAGTAA TTGGGCTGAG GTATATGTGT ATTTATGGAC AGGGCCAGAA
GGGCAAGCAG TAGAAGTAGC GCCGTGGCCA GGTGTACGCA TGGCAGGGCC AGACGAAAAT
GGTATATGGC AATATACTGT CAACCCAGCG AATCTAGTCG ATGGTAAAAC CAATGTTATA
TTTAACAATA ATAACAATGG TGCTCAAACG CCTAATCAAT TAGATGTTGC ACAAGCCTCG
CTGTATAACA ACGGTATTTG GACACCGCTA ACACCTTCTG CCGGTGTATC TCGAATTTCC
GTTATTGCTG GTGCAACGCC TAACCAAGCA ATGGATTTTG AAATAGGAAC CGTTATTACC
GTAACGGCAA ATACGGCAAC CGTAGGCACA GAGTTTAGTG GTTGGAGTGG CGATGGTGTG
GCTTATATTA TTAGCGACCC AACCTTGCCA ACCGTGCAGG TACTTATTCC TAACCACGGT
ATTGCGTTAC AAGCTAAATT TGGAGAAGAC GCTACCGATT ATGAAACCGC ACGTGTGCTA
TTTGACGGTG GTTGTGCGGG GTGTCATGGC GATGGTGGCA GTGGTGGTAT TGCTGTTGCG
TTAAATCAGT TGCATGAATC TAATCGTTAT ACGCAAGCAA CTTTAAGCAA TTATATTGCT
GAGTTTATGC CATCTGGTAA TACGAGTTCA TGCTCGGGCA CAAACCCTGG CGACTGCGCA
TACGATATTG CAAAAATGAT TTTGAACAAT AAGTGGTTGG CGTGCGATGG GCCAGAATGC
GATGGCAACA GTTTAGATGC ACGTAATTTA CGCCTGCTAA CGAAACAGGA ATACTTAAAC
AGTGTGCGTG ATATTTTCGG TATTCAATTT GACGAAAGCA TTATGGCTTC GGTGCCTGCA
GACGGCACCT TCAGAAACTT TACTACTGCT TCGTCTTTGG TGGCAGATAC CGATCGCACC
TTAGGTTTTC AAATGGTCGC GGAAGAAGTA GCAACCACTG CAATTAATAC GTTCACTTTT
AATGGCTTGG CTAGCGGTTG TAGTAATAGC CAATGTGTTG TTGAGCAATT GGGTAGAAAG
CTATTCCGCC GTCCATTAGC AGCGGACGAA GTACAACGCT ACCTAGCGTT ATACGATGCG
AGCGAAGACG GTTTAACGCT TGTGCAGGGC TTACTCATGT CGCCGCACTT TATGTATCGC
TCAGAAATGG GTGTGCTAAA TGCGCAAACA GGCCTGTACG AATTAACCGA TCACGAGTTG
GCAACCTTAT TGGCCTACAC CTTTTGGGTA ACCACACCCG ATGAAGCACT GCTGGCAGCA
GCAGATGCCG GTACTTTAAA CGTAGAAGAG CAGGCCGAAC GCTTGCTTAC CGATGCGCGA
GCAGAGCGGG GGTTGCGTCG TTTTGCTTCC GGTTGGCTTA TCAATAGTCA GTACCCATTC
CCTGCTATAA ACAGCGCAAG CTTAGTGGAT GCGTTTAAAG AAGAAACTAT TCACCTAGTT
ATGGAAGGTA TTCGCAGCAA TGCGCCATTT AACAGTTTAT TAACGGCAAA TTATACCTAT
GCCAATAACG AGCTGGCTCA GCATTACGGG TTAGGGGCTA CAAGCAATTG GGCGAAAATG
TTTTTCCCTG CAGACGACCC GCGTGCGGGC GCAGGTTTAC TTGGGCACGG CAGCTTCTTG
GCATCACGCA CCAGTACAGT TAACCCAGCG CCTATTAAAC GTGGGGTATA TGTGCGCGAA
GCCATTATGT GTCAAGAGTT TCCACCCCCC GCAGCGGCAA ACTTCGATAT ATCGTTTGAA
CCTTCAGACA GCAACCGCGA TGCAACTTCG CGACATACGT CGGATGCTGC TTGTGCAACC
TGTCACCAAT ATATCGACGG TGTGGGGTTT GGTTTCGAGC GATTTGGCAG CGACGGTTTG
TACCGTGCAC TGGAAACACT CGGCAATGGC GTTATTCAAG AAATTGACGA TTCCGGCTCG
ATTAAAAGTT TGACCTCACC AGAAACAGTG CTCGACCCAG ATAGCGAAAG CGTTGCGTAT
TTTTCTGTGC CTGAGCTTGC AGGGTTAATT GCCGAAAGCG GGCAAGGGGA AGCGTGTTTC
TCTCGTCAGT TTTATCGTTA TACCGTGGGT AGAAACGAAG AGAGTGAAGG CGACGAAATA
TTTATTCGCG AATACAGCGC AGACTTGCGC AATGGTGGTG GCATGTTCGA CATGTTAATC
GATCTAACAA CTTCAGCAGC GTTTGGCGCT CGCCACTAA
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| Protein sequence | MFVSFVSVVT KLMCAMRCPL GRRISWMLVF IAAALPQASC GQSNLWESAY FRGTPNDWNA
SAMTFNAEKG AWYTRQTFGA DNPRFKITKN NNWDESYPAN DFLITHGAGD YDILFNDATK
AITATKVVTY SAPISENSIC FANTSNFATP NVYFWNAAPA NSLTGAPAWP GETMAAVQYE
AGAYYCYTLT DYLTGQTMPN SLSVIFSNAG ANQTNDLFTD NGYCFKNNMW QSLTACGIEI
VPVEELLIAN AGNDREIEEG NTLTLSAAAS EGNYTNAIWQ SDAWQGSLTG AEVTTPLLNE
PGVYTVTLTL EGQALTSSDS FTLTVTAKPE VNTSNNICFD NIQNFAQPTI YFWNATPAGS
LNALPNWPGH AMAVVGNYVC YDFTDIIVSG AAMPSALNVI FSNSGNNQTE DLLFDGNACY
AASTWQSMAA CGFEPKPVLI AEAGENQTVQ AGSNTVLSAA GSQGQFETAV WQSSAWAGEI
NGSPAVTPNL AVVGEHTVTL TIANGETTAQ DTFTLTVTAR PTTHGMTERP LLSEPLAFPV
SGNVSAGAYR FEKAFPNLEG QFLSPVMILP DGINDLIFVV DKPGSIFVFP NDENVAPNQV
HEILDIKNSV RNYHEQGLLS MAFDPNYASN GFIYIYYIHG EDDNERAPDG QYGDAILERY
TINDPLNPTS VVAGSNVEVL RVPQPGPDHK GGMMQFHAEE GYLYLSIGDG AYGHSAIESF
PEDPRTNNSA QDTTNLRGSM IRIQPLEFPV DGKYYAVPSD NPFVGMGNYR PEIWSYGHRN
PWRWAFDTEA PYTIWQTEVG QAGFEEVNLI QKGKNYGWPI CEGLTNRGAL GGDASKSCAT
DFEPPREGYF QPEGFSIIGG IVYRGNKLPN LTGHFIFGDY VTKKIWSIVD GDAKQLVSDA
FPENIVSFGT DLSGEELFVS TYGVEYGGNS TIYKVVDDDA EAAVIPQTLS ATGLFADLTT
LTPVSGVIEY DVNTDGWFDG AIARHFISIP NDTTIAFNSV ENWQLPVGAV LVKHLSVMGE
NNSQIPFTTS VLFKQQSGNW QAANYHWNEA GTEATLVTQT INVTDNGIEP RTRAVQSAGD
CGSCHTGSGS KDPLALHTRQ LNKVFDYSGV LDNQLDAFNY VGLFDQTINS GSDYNVFAAI
DDETSSTSLR ARSYMDTNCS HCHSSSFMDL QFDTPLMETR LLDVQTTSDK VRLRPFDHAN
SLVYIYQTSD GNRMPKGSRY TNPLAQTVFE QWINAEDATQ VGVELFSSGT RFAVGDSVRL
DVKALYDNEF PLDNLDPVIW GSSNNAVVSV ANTDENTQTL ALNTVGTATV TVQAGAYSDQ
ISITVTDSDA SIVGLEIFPA DIALAQSQQL VAYGLRADGS RVNLYGEVTW SVSAGASNVA
VDSTGLLTRA AEGEATVTAS YADLIAASQI TNAQQDFVLQ YNNTTSNWAE VYVYLWTGPE
GQAVEVAPWP GVRMAGPDEN GIWQYTVNPA NLVDGKTNVI FNNNNNGAQT PNQLDVAQAS
LYNNGIWTPL TPSAGVSRIS VIAGATPNQA MDFEIGTVIT VTANTATVGT EFSGWSGDGV
AYIISDPTLP TVQVLIPNHG IALQAKFGED ATDYETARVL FDGGCAGCHG DGGSGGIAVA
LNQLHESNRY TQATLSNYIA EFMPSGNTSS CSGTNPGDCA YDIAKMILNN KWLACDGPEC
DGNSLDARNL RLLTKQEYLN SVRDIFGIQF DESIMASVPA DGTFRNFTTA SSLVADTDRT
LGFQMVAEEV ATTAINTFTF NGLASGCSNS QCVVEQLGRK LFRRPLAADE VQRYLALYDA
SEDGLTLVQG LLMSPHFMYR SEMGVLNAQT GLYELTDHEL ATLLAYTFWV TTPDEALLAA
ADAGTLNVEE QAERLLTDAR AERGLRRFAS GWLINSQYPF PAINSASLVD AFKEETIHLV
MEGIRSNAPF NSLLTANYTY ANNELAQHYG LGATSNWAKM FFPADDPRAG AGLLGHGSFL
ASRTSTVNPA PIKRGVYVRE AIMCQEFPPP AAANFDISFE PSDSNRDATS RHTSDAACAT
CHQYIDGVGF GFERFGSDGL YRALETLGNG VIQEIDDSGS IKSLTSPETV LDPDSESVAY
FSVPELAGLI AESGQGEACF SRQFYRYTVG RNEESEGDEI FIREYSADLR NGGGMFDMLI
DLTTSAAFGA RH
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