Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_2356 |
Symbol | |
ID | 3967389 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 2984748 |
End bp | 2985536 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637921447 |
Product | uroporphyrinogen-III C-methyltransferase |
Protein accession | YP_527828 |
Protein GI | 90022001 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0007] Uroporphyrinogen-III methylase |
TIGRFAM ID | [TIGR01469] uroporphyrin-III C-methyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.463328 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.682274 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTAATT CAAAACCTGG CAAAGTATGG TTAGTAGGCG CCGGCCCCGG TGACCCAGAT TTACTAACTG TAAAAGCGCT TCGAGTTATA CAGAATGCAG ACCTTGTGTT ATTCGATAAC CTCGTAAGCC AAGAAATTCG AGCTTTATTC CCTAAATCTG TGCCGGCCTT TTATGTAGGT AAGTGCAAAG ATAATCACAG CATCGCACAA AAAGATTTAA ACAGCTTGCT CGTTAAAAAA GCGGCCAAGG GTTTGAATGT TGTGCGCATT AAAGGCGGCG ACCCCTTCGT GTTTGGTCGT GGCGGCGAAG AGTTACTTAC CCTTATTAAA GCCGGAGTAG ATGCCGAGGT TGTACCTGGT ATTACATCTG CTTCTGGTTG CACAACCGCT GCAGGTATAC CGCTTACTCA TCGCGGTTTG GCGCAAGGCT GCACTTTTGT AACAGCACAT GCAGAAACAG AGTTATCCGT AGACTGGAAC GCGCTAGCGC AAATTAATCA TACGCTTGTT TTTTACATGG GTGTGAGTCG CGCAGAAATG ATCGCCAGCA ACCTATTAAA AGCCGGCTTA AGTGCCGCAA CGCCAGTGGC CATTATCGAA AATGGCTGTC GTGAAAACCA GCGCGAAGTA ATCGGCCAAA TAAAAGATTT GGTATCGCTG GTAGCAAACA ACAACGTTCA ATCGCCTGCT CTCATTGTAG TAGGTGAGGT TGTTTCTCTT GCAAATGATT TAAACCCCGA ATTAAGAGCT GCTGTGTCAG CCGAAACACT GAATCAACAC GTGGCCTAA
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Protein sequence | MSNSKPGKVW LVGAGPGDPD LLTVKALRVI QNADLVLFDN LVSQEIRALF PKSVPAFYVG KCKDNHSIAQ KDLNSLLVKK AAKGLNVVRI KGGDPFVFGR GGEELLTLIK AGVDAEVVPG ITSASGCTTA AGIPLTHRGL AQGCTFVTAH AETELSVDWN ALAQINHTLV FYMGVSRAEM IASNLLKAGL SAATPVAIIE NGCRENQREV IGQIKDLVSL VANNNVQSPA LIVVGEVVSL ANDLNPELRA AVSAETLNQH VA
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