Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_2288 |
Symbol | |
ID | 3967341 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 2910436 |
End bp | 2913219 |
Gene Length | 2784 bp |
Protein Length | 927 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637921379 |
Product | peptidase M24A |
Protein accession | YP_527760 |
Protein GI | 90021933 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
TIGRFAM ID | [TIGR01782] TonB-dependent receptor [TIGR03304] outer membrane insertion C-terminal signal |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000032845 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.0000000380326 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGTATAAAC GCTCAGCACT AAGCAGCAGC ATTGCAATTG CCGTTGCCCT AACTAGCCAA TACAGCCTTG CACAAAACGA GGCCGACGCT AGCTTAGAAG AAGTGATAGT TACTGGTATT CGCGGCAGCT TAACCAAAGC ACTGGATATG AAACGCGAAA ACACCCAAAT AGTGGATTCT ATTGTTGCGG AAGATATTGG TAAGTTTCCA GACAATAACG TTGTAGAAGC CTTGCAGCGC GTATCCGGCG TACAAGTTAC AGATCGCGGC GCAGGTGAAG TAAACACGGT GTCTATTCGC GGTTTAACAG ACGTAACCAC CACCGTAAAT GGCCGTCAAA TATTCACCTC TACCGGCCGC TCTGTAGCGC TTGCAGACAT CCCTGCCAGC TTGGTTGCGG GTGTAGATGT GTACAAAACA CGCTCAGCCT CGCAAATTGA AAGTGGTATT GCAGGCCAAG TCGATATAAA AACACAGCGC CCATTCAATT TTGATGGCAG CAAAGTGGTA ATAGCCGCTC GCGGTACCTA CCAAGAGCAA GCAGAAAAAA CCGACCCCAA TTTAAGTGCG CTATTCAGCA ACCGCTGGGA AACCTCCGCC GGTGAGTTTG GTGCACTGCT AAACGTATCG TTTGCGCAAA CAAATTACCG TGACCAAAGC GTTACGCCCG GTGCGCAAGT GCCCTTTATG ACCGCCAATG CAGCTGATGG CTGGGTGCCT TTTGAACGCA TCTTTCCTAC AGACGGCCGA GTAACAGAAA GCCCCATTTG GGAAGGCGGC CTAGAAGAAG GCTTACCCGC TACCGAAGGC TCTACCTTGA CCATGAATGG CGAAGAAATA GAGTACCTAC TTTCACGCGA TGCCATTTTC GCCAGCGACT TTACCGGTAA GCGCGAGCGC CCCGCTTATA ACGTAGCGTT CCAATTTGCA CCCAACGAAA CATCCGAGTA CCTATTTGAA GCCTTCTACA ACGGCTACCG CAACGAGTCA TTTAACTCTT TGTTATTTTC CTTTGCCGAT TGGTGGGGCT CTTTAGACCC AGCCGATGAA GTAGTCACCT ACCCGGGCAC AAACATTGTT AAAGAACGCA CTGTTTACAA TCCCTACGGC TTTAACAGCG GTGATTTAAC TGTAAGCCAA ACAGATAGTT ATGTGTACGC TTTAGGCGGC AACTGGGATA TCGGCGATAA CCTAACATTA GAATCTGAAA TAGTTCACCA AACCAGCGAA TACTCATCGG ACTTCTTCGC GATGCGAACC GATAGAGTGG CACACGGTAT AGATGTCGAT TTCAATTCAT CTGGCGGTTT ACCTGCTTGG GCATTTATCG ATAATCCCGA AACGGCAGAC GTTAACGAAG CAGACCTCAC CGATTCAGCC CAATGGAATG TGGCCGAACT ATACGACAAT GGTGTAGAAG ACAAAGGTAC ATCCACCACC TTCACTGTTG ACGGTTCATA CTCGTTATTT AATAGCTTTT TTACCAATAT AGATTTTGGT GCTAGCTACG ATGTGCGTAC AGCACAAAGC GCTAACCGAG ATATAAATGG CTTTTTAGGT CAGCCTCTTT CTTCGTTAGA TGCGGGTGCT TCCTACGTTA CTGAAGATTT CTATGATGGA CGTGCAGATA TTCCAACCAC GTGGGTAGTG CCCAATGGCC ATTATATTTA TAGCCACCGC GACGAGTTCC GCGATTTATA CGGGTTTACC TCTGAAGAAA ACATCGAGAA GTTATCGTTA AAAACTAATT TTGATATCGA AGAAACCACA ACCGCGGTTT ACGTTCAAAC CGATTTCGAA ACAGAACTAG GCAATGGTAC ATTGGGTGGC CAGTTTGGTG TGCGCTATGT GGGTTCAAGT GCGGATATGA GCTTCTTCGA CAACGAAGAC TCAAGTACAG CAGACCGCAG CGACTCGGCC TTATTACCAA GCCTTGTTTT AAAATACGAA TTTGCTAACG ACTTTATGGC GCGTTTTGCT TACACAGAAA CATTGCGTCG CCCTGCATTT GGCCAGTTAA ACTCGTTTAT TTACTATAAC GAGTCTGTTA CCAATACTGA CGGCACTGCC ACCGGTGGTA ACCCAGACCT TAAACCCGTT GAATCGGTTA ACTTGGATTT ATCGCTAGAG TGGTATTTTG CCGAGGGCAG CGCCCTATAC GGCACCTTGT TCCAACGCAA TATAGAAGGC TTTGTATTCG ATTCTCGCCA ACGTGTAAGT TACCAAGGGC CAGACGATAC CGAAGCATCT GATTACATTT TAAGCCTGCC AGATAACGCA TCTAACGGTG AGCTAAACGG GTTAGAATTG GGCTTGGTTT ATTTCCCCGA TAATTTACCC AATGCATTAG ATGGCTTAGG CGTACAAGCA AGTTACACCA TGCTAGATTC CTCGCAAGAT GTACCCGTGT TTGGCGCAGA TGGCGAGCTA GAAAAATACT TAACTCGCTC TATGTTTGGT GTTTCAGATA ATTCTTATAG TGTTGTGGTT GCGTACGAAA AAGAGAAATT TAGCGCGCGC TTATCGTTTC TTGCCCGCGA TAATTTCTTA AATAATTACG AAGCCGCCGT ATTCGCCAAC CCACTAGGCG TATACCGCAA GCCAGAAAAG AGCATGGATT TGCAGTTGAG TTACGACGTA ACCGACGATT TAATGCTAAC GTTTGATGCA ACCAACTTAA CCGATGAGGT TTTCCAAAGC TATTACGAAA ACCCACAAAC CAACAACTTA GGCAACGCTA TCTACAGCCG CACCTTCTCG TTGGGCTTGC GCTACACCTA CTAA
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Protein sequence | MYKRSALSSS IAIAVALTSQ YSLAQNEADA SLEEVIVTGI RGSLTKALDM KRENTQIVDS IVAEDIGKFP DNNVVEALQR VSGVQVTDRG AGEVNTVSIR GLTDVTTTVN GRQIFTSTGR SVALADIPAS LVAGVDVYKT RSASQIESGI AGQVDIKTQR PFNFDGSKVV IAARGTYQEQ AEKTDPNLSA LFSNRWETSA GEFGALLNVS FAQTNYRDQS VTPGAQVPFM TANAADGWVP FERIFPTDGR VTESPIWEGG LEEGLPATEG STLTMNGEEI EYLLSRDAIF ASDFTGKRER PAYNVAFQFA PNETSEYLFE AFYNGYRNES FNSLLFSFAD WWGSLDPADE VVTYPGTNIV KERTVYNPYG FNSGDLTVSQ TDSYVYALGG NWDIGDNLTL ESEIVHQTSE YSSDFFAMRT DRVAHGIDVD FNSSGGLPAW AFIDNPETAD VNEADLTDSA QWNVAELYDN GVEDKGTSTT FTVDGSYSLF NSFFTNIDFG ASYDVRTAQS ANRDINGFLG QPLSSLDAGA SYVTEDFYDG RADIPTTWVV PNGHYIYSHR DEFRDLYGFT SEENIEKLSL KTNFDIEETT TAVYVQTDFE TELGNGTLGG QFGVRYVGSS ADMSFFDNED SSTADRSDSA LLPSLVLKYE FANDFMARFA YTETLRRPAF GQLNSFIYYN ESVTNTDGTA TGGNPDLKPV ESVNLDLSLE WYFAEGSALY GTLFQRNIEG FVFDSRQRVS YQGPDDTEAS DYILSLPDNA SNGELNGLEL GLVYFPDNLP NALDGLGVQA SYTMLDSSQD VPVFGADGEL EKYLTRSMFG VSDNSYSVVV AYEKEKFSAR LSFLARDNFL NNYEAAVFAN PLGVYRKPEK SMDLQLSYDV TDDLMLTFDA TNLTDEVFQS YYENPQTNNL GNAIYSRTFS LGLRYTY
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