Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_2286 |
Symbol | |
ID | 3967339 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 2908050 |
End bp | 2908604 |
Gene Length | 555 bp |
Protein Length | 184 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637921377 |
Product | hypothetical protein |
Protein accession | YP_527758 |
Protein GI | 90021931 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR02595] PEP-CTERM putative exosortase interaction domain |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.172831 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.000015339 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCGAAATC TTTTAAAACA AGCAGGATCA AAAATAATTG CATCAACAGC CATACTAGGA CTATCACTCT CTGCACACGC AGGGTTGTTT GAGTATTCCT ACAGTTTTGG GAATGGCAAT AGCGTAAGCG GCACACTTAC AGGCGATGTT AACGGCGCCT ATGTTCAAAA CGTAGAAGCC GTAACACTTA CTATTAATAC CCAGGAATTA AATCAAACGT TTTACGATGT AGGCTTAACG AATGGCAGCT GGAGTGGCGA CGCGATAGTT TCATTTGATG CAAGCCTAAA TAACTTTTTG TTTAGCGATG TAAATTACCC ATCGCAAACA AATTACTCGG TGTTTTTCCA AATGATAAAC TACGGGTCTA CGCACAACGC TAAAATATAC AACAAAAACC CAAGCGTATA CTCTTCCGAC CGCCCCATTA ACGCGAGCGC ATGGTCGCTT ACCGAAGTAG CAAGCGTACC CGAACCCGCA TCGCTAATAC TTTTTGGGCT AGGCCTTATA GGCGTTGCAG CTAGTCGCCG CAAAAATATG AAAATTAGTA ACTAA
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Protein sequence | MRNLLKQAGS KIIASTAILG LSLSAHAGLF EYSYSFGNGN SVSGTLTGDV NGAYVQNVEA VTLTINTQEL NQTFYDVGLT NGSWSGDAIV SFDASLNNFL FSDVNYPSQT NYSVFFQMIN YGSTHNAKIY NKNPSVYSSD RPINASAWSL TEVASVPEPA SLILFGLGLI GVAASRRKNM KISN
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