Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_2275 |
Symbol | |
ID | 3967951 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 2892792 |
End bp | 2894009 |
Gene Length | 1218 bp |
Protein Length | 405 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637921366 |
Product | cellulose-binding family II protein |
Protein accession | YP_527747 |
Protein GI | 90021920 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.423052 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATTGT TAGCCACTCT ATTGTGTGCA TTGAGTTGCA GCGGCGTACA CGCCTCTAAG GCTGATGCGC CTAGTGAGCC ATTTCGCCTT GTTACAAGCT ATTCTACTGC TCCACCTTCT TCTTCTGTTG TAGGGTCGGC TACCTCTGTG GTGGCAGATT GTATATTCAA CAACCTTGGG GTGAGCTACG AGCTTACTCA GCTCCCTTGG CTGCGGGCGC ATATGCAGTT GGTTACGGGG CGAGCCGACG GTATTCTCCC CATGATTAAT CAGCCCCAAT TGGAGGAGGT GGCCAAGCGT TCAGCGCCAT TCGGGCTGGA AAAATGGTAT TGGTTTAGCA AAAGTGACAC GCCTATTACC ACCCTTGTGC GCGACAAATC CCTTGCTATA GCTACCTTGC GAGGCAGTAA TCATGCGTTG TGGCTAGCGC GCAATGGTTA CATTAATGTG ATGGAGGTGG AATCGACCAG TCAGCTTAGC CGGCTGCTTG ATTTAGGTCG TGTAGATGCT GTCTTTTTTG AGTTGCAGTG GGCACTAGAC GCCTATGGTG AACAATTTGG TGCCAGTGGG AGTATTAAGT TTCACTTTGA GCGCTATGCT GCTTTGGGGC TCTATGTGGC TGAGCAATCG CTTAAGCGGT TTCCTGACTT TATGCGCAGG TTTAACCGCG AAATAGAAAA ATGTAGCCCA GAATGGGTGG CGCTTAGCGA TGTTGAAGTA GAGCTTATCA AAACAACTAT CTTTGAGCCT GTGCGTGTTA ACTTGGGCAG TAATTCGGTT TTGAAAGGGG CTTTGCAAGC GGCGGCTAGT CAACCGGCTA GTGAGGTGTT AGCAGACCTC GATGATCGCT GGCGTGCGGA GCTAAAGAGT GGTGACTACA ATTTAATAAA ACAGGTAGTA GAAAGCCCTT TATCGCTACT ACTTCGCCAA GAAGTAGAGC TGCAGTGCGG TAGTATTTCA GAGCTAATTG TTACAGATAG GTTTGGTGCA AATGTGGCGG TAAGTCAGCC CACTACTGAT TATTGGCAAG GGGATGAAAT TAAGTTTCGC TCAGTTGTGA ATTCTGGCTA TAAAACCTAT TTTGGGCCAA TGCAATACGA TGCCTCTACG CAGAAATTCC AAACCCAAAT AAGCGCCCCA ATTCTGGATG AAGCAGGTGT GTTTATTGGT TTGCTGGTGA TGGGCGTGGA TGTGGAGCGG GCTTTAGAGA AACTATAA
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Protein sequence | MKLLATLLCA LSCSGVHASK ADAPSEPFRL VTSYSTAPPS SSVVGSATSV VADCIFNNLG VSYELTQLPW LRAHMQLVTG RADGILPMIN QPQLEEVAKR SAPFGLEKWY WFSKSDTPIT TLVRDKSLAI ATLRGSNHAL WLARNGYINV MEVESTSQLS RLLDLGRVDA VFFELQWALD AYGEQFGASG SIKFHFERYA ALGLYVAEQS LKRFPDFMRR FNREIEKCSP EWVALSDVEV ELIKTTIFEP VRVNLGSNSV LKGALQAAAS QPASEVLADL DDRWRAELKS GDYNLIKQVV ESPLSLLLRQ EVELQCGSIS ELIVTDRFGA NVAVSQPTTD YWQGDEIKFR SVVNSGYKTY FGPMQYDAST QKFQTQISAP ILDEAGVFIG LLVMGVDVER ALEKL
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