| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2227 |
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| Symbol | |
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| ID | 3964831 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 2830363 |
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| End bp | 2831673 |
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| Gene Length | 1311 bp |
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| Protein Length | 436 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637921318 |
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| Product | aminotransferase |
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| Protein accession | YP_527699 |
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| Protein GI | 90021872 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0161] Adenosylmethionine-8-amino-7-oxononanoate aminotransferase |
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| TIGRFAM ID | [TIGR00508] adenosylmethionine-8-amino-7-oxononanoate transaminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 44 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0186797 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGAGTATTG AACGCTCCCC TCTCAGCGAA GCGGAAATAA TGCGCATCGA CGCCGAGCAT
ATTTGGCACC CCTATTCGTC TTTCAAAAGT GCCGTACCGG TATTTCCGGT TAAATCTGCA
CAGGGCGTGT ACCTCCACCT ACATAGTGGT GAAACGCTCA TCGACGGCAT GTCGTCTTGG
TGGAGCACAC TACACGGTTA CAACGCTACA GCTATTAGCG ATGCAATTGC TAAACAAGCC
CAACAACTAA GCCACGTTAT GTTTGGCGGC CTTACCCATG AACCTGCGGC CTATCTCACC
AAACAACTAG TTAAGCTATC CCCTGATGGC CTAGAGAAAG TATTTTTATC CGATTCCGGC
TCGGTAGCGG TAGAAATAGC AATGAAAATG GCTATTCAAT ATTGGCACGC CAAAGGCCAG
CCCAATAAAA ATAAAATGCT CGCGCTGCGC AATGGCTATC ACGGCGACAC CATTGGTGCT
ATGTCGGTGT GCGACCCTGT AACAGGTATG CACCACTTAT TTAAAAATAC GCTTACCCAG
CAAGTATTTA CCGAACAACC AGCATGTAAG TTTCACGAAC AATGGGACGA AAGTTACCTA
ACCGATATAA AGCAACAAAT TGCAAACCAT AAACACGAAC TTGCCGCTGT TATTCTTGAG
CCTGTTGTAC AGGGCACAGG CGGTATGCAT TTTTATTCGC CGGAATATGT GAAAGCGGTA
AAAGCGCTTT GTGAAGCTAA TAACTTACTA CTAATTGCAG ATGAAATAGC TACCGGCTTT
GGCAGAACAG GCAAGATGTT TGCCTGCGAA CACGCTGGTA TAACGCCCGA TATTATGTGT
TTAGGTAAAA CCCTAACCGG CGGCACCATG ACGCTAGCGG CAACCCTATG CACCAACAAA
GTAGCCGACA CCATTTGCAA CGCAGAGCCC GGTGTATTTA TGCATGGCCC GACTTTTATG
GGCAACCCCC TTGCCTGTAC AGCTGCCAGT GTAAATATAG ACCTGTTATT AAATTCCAAT
TGGCAAAGTA ATATCAGCAG GCTGCAAACT GGTTTACTTG AAGGGCTGCT CCCTTGCAAA
CACAATGCGA AGGTAAAGGA CGTGCGCACA CTGGGTGCAA TAGGCGTTGT AGAAATGCAA
GAACCGGTTG ATATGGCAAA AATTCAACCA ATGTTTGTTG AGCACGGCGT ATGGCTGCGA
CCGTTTGGCA AATTAATATA CATGATGCCC GCTTACATAA TGCAAGACGA GCAATTAAAA
ACGCTAACCC AAGCCGTGTG CAACGTAATA GAAAAATACA CAGCTCAGTA A
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| Protein sequence | MSIERSPLSE AEIMRIDAEH IWHPYSSFKS AVPVFPVKSA QGVYLHLHSG ETLIDGMSSW
WSTLHGYNAT AISDAIAKQA QQLSHVMFGG LTHEPAAYLT KQLVKLSPDG LEKVFLSDSG
SVAVEIAMKM AIQYWHAKGQ PNKNKMLALR NGYHGDTIGA MSVCDPVTGM HHLFKNTLTQ
QVFTEQPACK FHEQWDESYL TDIKQQIANH KHELAAVILE PVVQGTGGMH FYSPEYVKAV
KALCEANNLL LIADEIATGF GRTGKMFACE HAGITPDIMC LGKTLTGGTM TLAATLCTNK
VADTICNAEP GVFMHGPTFM GNPLACTAAS VNIDLLLNSN WQSNISRLQT GLLEGLLPCK
HNAKVKDVRT LGAIGVVEMQ EPVDMAKIQP MFVEHGVWLR PFGKLIYMMP AYIMQDEQLK
TLTQAVCNVI EKYTAQ
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