Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_2212 |
Symbol | flgC |
ID | 3965450 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 2815433 |
End bp | 2815867 |
Gene Length | 435 bp |
Protein Length | 144 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637921302 |
Product | flagellar basal body rod protein FlgC |
Protein accession | YP_527684 |
Protein GI | 90021857 |
COG category | [N] Cell motility |
COG ID | [COG1558] Flagellar basal body rod protein |
TIGRFAM ID | [TIGR01395] flagellar basal-body rod protein FlgC |
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Plasmid Coverage information |
Num covering plasmid clones | 52 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTTTAT CAGGCATATT TGACACAGCG GGCTCCGGTA TGAATGCACA GAGCGTTCGC CTTAATACCA CAGCAAGCAA CATTGCAAAC GCAGAAACCG CAAGCTCTAG CGCAGATACC GTATACCGAG GCCGCCACCC AGTTTTTGCC ACTGTGCAAG CAGGGTATAT GCAAGGCCAA GTAGGCGCCT TGGATGATGA GCAAGAAATG GGCGTGCAGG TAATGGGTAT TGTTGAAAGT GATGCACCTT TGCAAAGGCG TTATGAGCCA GGCCACCCGC AGGCGGATGA AGAAGGTTAT GTGCACTATC CAAACGTTAA TATCGTAGAA GAAATGGCCA ATATGATTTC TGCTTCGCGC TCGTTCCAAA TGAATGTAGA GGTTATGAAT TCTGCCAAGC AAATGGTGCA ACGCGTTTTA CAGCTTGGCC AATAA
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Protein sequence | MSLSGIFDTA GSGMNAQSVR LNTTASNIAN AETASSSADT VYRGRHPVFA TVQAGYMQGQ VGALDDEQEM GVQVMGIVES DAPLQRRYEP GHPQADEEGY VHYPNVNIVE EMANMISASR SFQMNVEVMN SAKQMVQRVL QLGQ
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