Gene Sde_2176 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_2176 
Symbol 
ID3967560 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp2769378 
End bp2769920 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content43% 
IMG OID637921266 
Productflagellar basal body-associated protein FliL 
Protein accessionYP_527648 
Protein GI90021821 
COG category[N] Cell motility 
COG ID[COG1580] Flagellar basal body-associated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.48892 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGAAG AGAAAGATGC CGAGAAAGAT GAAAAAGATG GCGCTGAAGA AGGGGCTAAA 
AAAGGTGGCG GGTTAAAACG AATCATTATT TTGGCGGTAG TTTGTCTAGT AATAGTAGGT
ATTTCTGTAG GTGGTACTTT AACCGTATTA AAAATGACTC AGCCGCCCGC TGCACCAGCA
GAGGGTGAAG AGGGTGCGGC GGAGCCAGTT GAAGAAGTTA AAAAAGATGC GATTTATTTT
CCAATTAAGC CAGAAATAAT CGTCAACTAC ACGGCACGTG GCCGGCAGCG CTACTTAAGA
ACAGACATAA CTCTGCTTAT TAGAGATGTT GATGTGATAG CGGCAATCGA AACACATATG
CCAATGATAA GAAACACCCT AAATATGATT ATTGGCGGGC AGGTTTATCA AGAAATTCAA
ACGGCGGAAG GCAAGGAGTT AATGCGACAG CAATGTTTGC AGGCGCTTCG TAAAAACCTG
GAAGCTGAAA TAGGTAAACC TGGCATCGAA GAAGTGTTAT TTACCAGTTT TGTTATGCAA
TAG
 
Protein sequence
MAEEKDAEKD EKDGAEEGAK KGGGLKRIII LAVVCLVIVG ISVGGTLTVL KMTQPPAAPA 
EGEEGAAEPV EEVKKDAIYF PIKPEIIVNY TARGRQRYLR TDITLLIRDV DVIAAIETHM
PMIRNTLNMI IGGQVYQEIQ TAEGKELMRQ QCLQALRKNL EAEIGKPGIE EVLFTSFVMQ