Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_2176 |
Symbol | |
ID | 3967560 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 2769378 |
End bp | 2769920 |
Gene Length | 543 bp |
Protein Length | 180 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637921266 |
Product | flagellar basal body-associated protein FliL |
Protein accession | YP_527648 |
Protein GI | 90021821 |
COG category | [N] Cell motility |
COG ID | [COG1580] Flagellar basal body-associated protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 0.48892 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGGAAG AGAAAGATGC CGAGAAAGAT GAAAAAGATG GCGCTGAAGA AGGGGCTAAA AAAGGTGGCG GGTTAAAACG AATCATTATT TTGGCGGTAG TTTGTCTAGT AATAGTAGGT ATTTCTGTAG GTGGTACTTT AACCGTATTA AAAATGACTC AGCCGCCCGC TGCACCAGCA GAGGGTGAAG AGGGTGCGGC GGAGCCAGTT GAAGAAGTTA AAAAAGATGC GATTTATTTT CCAATTAAGC CAGAAATAAT CGTCAACTAC ACGGCACGTG GCCGGCAGCG CTACTTAAGA ACAGACATAA CTCTGCTTAT TAGAGATGTT GATGTGATAG CGGCAATCGA AACACATATG CCAATGATAA GAAACACCCT AAATATGATT ATTGGCGGGC AGGTTTATCA AGAAATTCAA ACGGCGGAAG GCAAGGAGTT AATGCGACAG CAATGTTTGC AGGCGCTTCG TAAAAACCTG GAAGCTGAAA TAGGTAAACC TGGCATCGAA GAAGTGTTAT TTACCAGTTT TGTTATGCAA TAG
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Protein sequence | MAEEKDAEKD EKDGAEEGAK KGGGLKRIII LAVVCLVIVG ISVGGTLTVL KMTQPPAAPA EGEEGAAEPV EEVKKDAIYF PIKPEIIVNY TARGRQRYLR TDITLLIRDV DVIAAIETHM PMIRNTLNMI IGGQVYQEIQ TAEGKELMRQ QCLQALRKNL EAEIGKPGIE EVLFTSFVMQ
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